myRT

myRT report for GCA_003131965.1_20120500_P31

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Seq: PKWG01000105.1 Alphaproteobacteria bacterium isolate palsa_913 73.20120500_P31.7_contig_7654, whole genome shotgun sequence (16358 bp)
Overview 1 RT 1: 7805-12950 bp Neighborhood of RT #1 [7805, 12950] COG5345 RVT-UG7 DUF2946 Feature: gene Location: 7805-8869 bp Feature: domain Description: COG5345 Location: 8198-8864 bp Feature: domain Description: COG5345 Location: 81 98-8864 bp Feature: gene Location: 9261-9518 bp Feature: gene Location: 9605-11245 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 10010-10433 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 001 0-1 0433 bp Feature: gene Location: 11455-11910 bp Feature: domain Description: DUF2946 Location: 11566-11899 bp Feature: domain Description: DUF2946 Location: 1 1 566-1 1 899 bp Feature: gene Location: 12066-12950 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5345 (Uncharacterized protein ), RVT-UG7, DUF2946 (pfam11162)

Seq: PKWG01000168.1 Alphaproteobacteria bacterium isolate palsa_913 73.20120500_P31.7_contig_8945, whole genome shotgun sequence (8320 bp)
Overview 1 RT 1: 4165-7287 bp Neighborhood of RT #1 [4165, 7319] DUF1772 MarR RVT-Retrons LemA Feature: gene Location: 4165-4596 bp Feature: domain Description: DUF1772 Location: 4216-4588 bp Feature: domain Description: DUF1772 Location: 42 16-4588 bp Feature: gene Location: 4593-5060 bp Feature: domain Description: MarR Location: 4668-5028 bp Feature: domain Description: MarR Location: 4668-502 8 bp Feature: gene Location: 5162-6094 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5333-5849 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5333-5849 bp Feature: gene Location: 6442-6618 bp Feature: gene Location: 7047-7319 bp Feature: domain Description: LemA Location: 7050-7287 bp Feature: domain Description: LemA Location: 7050-72 87 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1772 (pfam08592), MarR (pfam01047), RVT-Retrons, LemA (pfam04011)