myRT

myRT report for GCA_003132765.1_20120500_P16

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Seq: PKYU01000477.1 Chitinophagaceae bacterium isolate palsa_955 73.20120500_P16.21_contig_1103, whole genome shotgun sequence (13340 bp)
Overview 1 RT 1: 641-6378 bp Neighborhood of RT #1 [641, 6378] recJ Methyltransf_23 RVT-GII GIIM RVT-GII Feature: gene Location: 641-2356 bp Feature: domain Description: recJ Location: 722-2327 bp Feature: domain Description: recJ Location: 722-2327 bp Feature: gene Location: 2371-3057 bp Feature: domain Description: Methyltransf_23 Location: 2578-2791 bp Feature: domain Description: Methyltransf_23 Location: 2578-2791 bp Feature: gene Location: 3136-3822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3148-3328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 48-3328 bp Feature: domain Description: GIIM Note: maturase Location: 3430-3625 bp Feature: domain Description: GIIM Note: maturase Location: 3430-3625 bp Feature: gene Location: 3731-4342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3923-4265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3923-4265 bp Feature: gene Location: 4906-5106 bp Feature: gene Location: 5224-6378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recJ (TIGR00644), Methyltransf_23 (pfam13489), RVT-GII, GIIM (pfam08388)

Seq: PKYU01000019.1 Chitinophagaceae bacterium isolate palsa_955 73.20120500_P16.21_contig_17946, whole genome shotgun sequence (5631 bp)
Overview 1 RT 1: 250-4257 bp Neighborhood of RT #1 [250, 4257] PIN_VapC-like RVT-GII GIIM Feature: gene Location: 250-510 bp Feature: gene Location: 787-1257 bp Feature: domain Description: PIN_VapC-like Location: 799-1168 bp Feature: domain Description: PIN_VapC-like Location: 799-1168 bp Feature: gene Location: 1497-2819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1797-2418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1797-2 418 bp Feature: domain Description: GIIM Note: maturase Location: 2535-2754 bp Feature: domain Description: GIIM Note: maturase Location: 2 535-2 754 bp Feature: gene Location: 3424-3600 bp Feature: gene Location: 3634-4257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_VapC-like (cd18715), RVT-GII, GIIM (pfam08388)

Seq: PKYU01000248.1 Chitinophagaceae bacterium isolate palsa_955 73.20120500_P16.21_contig_22203, whole genome shotgun sequence (4466 bp)
Overview 1 RT 1: 1058-3930 bp Neighborhood of RT #1 [1058, 4121] pro_imino_pep_2 RVT-GII GIIM Feature: gene Location: 1058-2404 bp Feature: gene Location: 2426-3286 bp Feature: domain Description: pro_imino_pep_2 Location: 2438-3278 bp Feature: domain Description: pro_imino_pep_2 Location: 243 8-3 278 bp Feature: gene Location: 3399-4121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3471-3651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 471-3 651 bp Feature: domain Description: GIIM Note: maturase Location: 3711-3930 bp Feature: domain Description: GIIM Note: maturase Location: 3 711-3 93 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pro_imino_pep_2 (TIGR01250), RVT-GII, GIIM (pfam08388)