myRT

myRT report for GCA_003132825.1_20120500_P15

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Seq: PKYX01000400.1 Acidobacteriaceae bacterium isolate palsa_270 73.20120500_P15.6_contig_25, whole genome shotgun sequence (3563 bp)
Overview 1 RT 1: 452-3093 bp Neighborhood of RT #1 [452, 3485] INT_ICEBs1_C_like RVT-GII Feature: gene Location: 452-1591 bp Feature: domain Description: INT_ICEBs1_C_like Location: 1007-1511 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 1 007-1 51 1 bp Feature: gene Location: 1681-1842 bp Feature: gene Location: 1983-3485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2397-3093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2397-3093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, INT_ICEBs1_C_like (cd01189)

Seq: PKYX01000494.1 Acidobacteriaceae bacterium isolate palsa_270 73.20120500_P15.6_contig_3014, whole genome shotgun sequence (17263 bp)
Overview 1 RT 1: 3553-10992 bp Neighborhood of RT #1 [3553, 10992] STKc_PknB_like propeller_TolB propeller_TolB BID_2 Beta_helix Beta_helix RVT-GII TPR retropepsin_like_bacteria retropepsin_like_bacteria Feature: gene Location: 3553-5655 bp Feature: domain Description: STKc_PknB_like Location: 3556-3847 bp Feature: domain Description: STKc_PknB_like Location: 3556-3847 bp Feature: domain Description: propeller_TolB Location: 4462-4726 bp Feature: domain Description: propeller_TolB Location: 4462 -472 6 bp Feature: domain Description: propeller_TolB Location: 5035-5353 bp Feature: domain Description: propeller_TolB Location: 5035-5353 bp Feature: gene Location: 5890-7821 bp Feature: domain Description: BID_2 Location: 6070-6292 bp Feature: domain Description: BID_2 Location: 6070-62 92 bp Feature: domain Description: Beta_helix Location: 6616-6976 bp Feature: domain Description: Beta_helix Location: 6616-6976 bp Feature: domain Description: Beta_helix Location: 7021-7507 bp Feature: domain Description: Beta_helix Location: 702 1-7507 bp Feature: gene Location: 7852-8007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7870-7978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7870-7978 bp Feature: gene Location: 8486-10129 bp Feature: domain Description: TPR Location: 8600-8933 bp Feature: domain Description: TPR Location: 8600-8933 bp Feature: domain Description: retropepsin_like_bacteria Location: 9242-9509 bp Feature: domain Description: retropepsin_like_bacteria Location: 92 42 -9509 bp Feature: domain Description: retropepsin_like_bacteria Location: 9749-10049 bp Feature: domain Description: retropepsin_like_bacteria Location: 9749-10049 bp Feature: gene Location: 10630-10992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), propeller_TolB (TIGR02800), BID_2 (smart00635), Beta_helix (pfam13229), RVT-GII, TPR (smart00028), retropepsin_like_bacteria (cd05483)