myRT

myRT report for GCA_003133265.1_20120500_P28

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Seq: PKWQ01000143.1 Acetobacteraceae bacterium isolate palsa_911 73.20120500_P28.34_contig_7288, whole genome shotgun sequence (22715 bp)
Overview 1 RT 1: 11185-14721 bp 2 RT 2: 18495-22469 bp Neighborhood of RT #1 [11185, 14721] AbiEii AbiEi_4 RVT-GII GIIM Neighborhood of RT #2 [18495, 22474] upstrm_HI1419 RVT-G2L4 HisM Feature: gene Location: 11185-12141 bp Feature: domain Description: AbiEii Location: 11326-12085 bp Feature: domain Description: AbiEii Location: 1 1 326-1 2085 bp Feature: gene Location: 12131-12544 bp Feature: domain Description: AbiEi_4 Location: 12170-12308 bp Feature: domain Description: AbiEi_4 Location: 1 21 70-1 2308 bp Feature: gene Location: 13092-14066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13095-13686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3095-1 3686 bp Feature: domain Description: GIIM Note: maturase Location: 13767-13992 bp Feature: domain Description: GIIM Note: maturase Location: 1 3767-1 3992 bp Feature: gene Location: 14335-14550 bp Feature: gene Location: 14566-14721 bp Feature: gene Location: 18495-18815 bp Feature: gene Location: 18832-19173 bp Feature: domain Description: upstrm_HI1419 Location: 18886-19147 bp Feature: domain Description: upstrm_HI1 41 9 Location: 1 8886-1 91 47 bp Feature: gene Location: 19414-20697 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 19642-20230 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 1 9642-20230 bp Feature: gene Location: 21155-21370 bp Feature: gene Location: 21779-22474 bp Feature: domain Description: HisM Location: 21833-22469 bp Feature: domain Description: HisM Location: 21 833-22469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_4 (pfam13338), RVT-GII, GIIM (pfam08388), upstrm_HI1419 (TIGR02683), RVT-G2L4, HisM (COG0765)