myRT

myRT report for GCA_003133725.1_20120500_P13

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Seq: PKZB01000230.1 Gemmatimonadetes bacterium isolate palsa_1240 73.20120500_P13.9_contig_11024, whole genome shotgun sequence (26792 bp)
Overview 1 RT 1: 22514-26771 bp Neighborhood of RT #1 [22514, 26791] InsQ RVT-GII GIIM AdhE Feature: gene Location: 22514-23719 bp Feature: domain Description: InsQ Location: 22790-23597 bp Feature: domain Description: InsQ Location: 22790-23597 bp Feature: gene Location: 23729-24103 bp Feature: gene Location: 24100-25359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24304-24961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24304-24961 bp Feature: domain Description: GIIM Note: maturase Location: 25045-25273 bp Feature: domain Description: GIIM Note: maturase Location: 25045-25273 bp Feature: gene Location: 25598-26791 bp Feature: domain Description: AdhE Location: 25658-26771 bp Feature: domain Description: AdhE Location: 25658-26771 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, GIIM (pfam08388), AdhE (COG1012)

Seq: PKZB01000261.1 Gemmatimonadetes bacterium isolate palsa_1240 73.20120500_P13.9_contig_5015, whole genome shotgun sequence (25024 bp)
Overview 1 RT 1: 3559-7200 bp Neighborhood of RT #1 [3559, 7250] HTH_ARSR NT_KNTase_like RVT-Retrons HipB Doc Feature: gene Location: 3559-3987 bp Feature: gene Location: 3984-4646 bp Feature: domain Description: HTH_ARSR Location: 4023-4173 bp Feature: domain Description: HTH_ARSR Location: 402 3-4173 bp Feature: domain Description: NT_KNTase_like Location: 4245-4509 bp Feature: domain Description: NT_KNTase_like Location: 42 45-4509 bp Feature: gene Location: 5087-5725 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5171-5696 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5171-5696 bp Feature: gene Location: 5732-6058 bp Feature: domain Description: HipB Location: 5741-5981 bp Feature: domain Description: HipB Location: 5741-5981 bp Feature: gene Location: 6774-7250 bp Feature: domain Description: Doc Location: 6855-7200 bp Feature: domain Description: Doc Location: 6855-72 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), NT_KNTase_like (cd05403), RVT-Retrons, HipB (COG1396), Doc (COG3654)