myRT

myRT report for GCA_003134045.1_20111000_S2M

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Seq: PLAH01000163.1 Gammaproteobacteria bacterium isolate bog_1204 73.20111000_S2M.32_contig_14322, whole genome shotgun sequence (3868 bp)
Overview 1 RT 1: 2051-3850 bp Neighborhood of RT #1 [2051, 3867] AcrR RVT-GII Feature: gene Location: 2051-2623 bp Feature: domain Description: AcrR Location: 2081-2585 bp Feature: domain Description: AcrR Location: 2081 -2585 bp Feature: gene Location: 2740-2916 bp Feature: gene Location: 3511-3867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3745-3850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3745-3850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), RVT-GII

Seq: PLAH01000063.1 Gammaproteobacteria bacterium isolate bog_1204 73.20111000_S2M.32_contig_5484, whole genome shotgun sequence (60827 bp)
Overview 1 RT 1: 52799-57484 bp Neighborhood of RT #1 [52799, 57594] TolC RVT-GII Acetyltransf_1 PRK03606 Feature: gene Location: 52799-54112 bp Feature: domain Description: TolC Location: 52808-54110 bp Feature: domain Description: TolC Location: 52 808-54110 bp Feature: gene Location: 54283-54489 bp Feature: gene Location: 55540-56184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55543-55900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55543-55900 bp Feature: gene Location: 56372-56767 bp Feature: domain Description: Acetyltransf_1 Location: 56444-56726 bp Feature: domain Description: Acetyltransf_1 Location: 56444-5672 6 bp Feature: gene Location: 56899-57594 bp Feature: domain Description: PRK03606 Location: 57274-57484 bp Feature: domain Description: PRK03606 Location: 572 74-57484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TolC (COG1538), RVT-GII, Acetyltransf_1 (pfam00583), PRK03606 (ureidoglycolate lyase)

Seq: PLAH01000004.1 Gammaproteobacteria bacterium isolate bog_1204 73.20111000_S2M.32_contig_55543, whole genome shotgun sequence (4200 bp)
Overview 1 RT 1: 2842-4121 bp Neighborhood of RT #1 [2842, 4198] RVT-GII Feature: gene Location: 2842-3231 bp Feature: gene Location: 3271-3423 bp Feature: gene Location: 3593-4198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3608-4121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 608-4121 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII