myRT

myRT report for GCA_003134375.1_20111000_S2D

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Seq: PLAY01000097.1 Verrucomicrobia subdivision 3 bacterium isolate bog_1418 73.20111000_S2D.10_contig_24256, whole genome shotgun sequence (7589 bp)
Overview 1 RT 1: 4834-7376 bp Neighborhood of RT #1 [4834, 7588] xerC RVT-GII GIIM Feature: gene Location: 4834-5919 bp Feature: domain Description: xerC Location: 4939-5866 bp Feature: domain Description: xerC Location: 4939-5866 bp Feature: gene Location: 5993-6874 bp Feature: gene Location: 6155-7588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6905-7088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6905-7088 bp Feature: domain Description: GIIM Note: maturase Location: 7145-7376 bp Feature: domain Description: GIIM Note: maturase Location: 71 45-7376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT xerC (PRK01287), RVT-GII, GIIM (pfam08388)

Seq: PLAY01000022.1 Verrucomicrobia subdivision 3 bacterium isolate bog_1418 73.20111000_S2D.10_contig_2576, whole genome shotgun sequence (38321 bp)
Overview 1 RT 1: 34610-38047 bp Neighborhood of RT #1 [34610, 38047] KdpC RVT-GII GIIM Feature: gene Location: 34610-35233 bp Feature: domain Description: KdpC Location: 34628-35183 bp Feature: domain Description: KdpC Location: 3462 8-35183 bp Feature: gene Location: 35680-35850 bp Feature: gene Location: 35886-36770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35892-36246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35892 -362 46 bp Feature: domain Description: GIIM Note: maturase Location: 36306-36534 bp Feature: domain Description: GIIM Note: maturase Location: 36306-36534 bp Feature: gene Location: 37037-37168 bp Feature: gene Location: 37760-38047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KdpC (pfam02669), RVT-GII, GIIM (pfam08388)

Seq: PLAY01000154.1 Verrucomicrobia subdivision 3 bacterium isolate bog_1418 73.20111000_S2D.10_contig_736, whole genome shotgun sequence (33432 bp)
Overview 1 RT 1: 18086-21128 bp Neighborhood of RT #1 [18086, 21128] HTH_XRE RVT_N RVT-GII GIIM Feature: gene Location: 18086-18271 bp Feature: gene Location: 18303-18704 bp Feature: domain Description: HTH_XRE Location: 18528-18690 bp Feature: domain Description: HTH_XRE Location: 18528-18690 bp Feature: gene Location: 18835-20343 bp Feature: RT Description: RVT_N Location: 18886-19129 bp Feature: RT Description: RVT_N Location: 18886-19129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19174-19819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19174-19819 bp Feature: domain Description: GIIM Note: maturase Location: 19879-20107 bp Feature: domain Description: GIIM Note: maturase Location: 19879-20107 bp Feature: gene Location: 20428-20700 bp Feature: gene Location: 20943-21128 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)