myRT

myRT report for GCA_003134815.1_20111000_P3D

Download annotations/find similar RTs

Seq: PLCO01000009.1 Acidobacteriaceae bacterium isolate palsa_249 73.20111000_P3D.47_contig_276, whole genome shotgun sequence (332776 bp)
Overview 1 RT 1: 58202-64318 bp Neighborhood of RT #1 [58202, 64413] GAF_2 GGDEF RVT-UG7 Gly-zipper_YMGG Feature: gene Location: 58202-59260 bp Feature: domain Description: GAF_2 Location: 58325-58736 bp Feature: domain Description: GAF_2 Location: 58325-58736 bp Feature: domain Description: GGDEF Location: 58772-59252 bp Feature: domain Description: GGDEF Location: 58772-59252 bp Feature: gene Location: 60089-60952 bp Feature: gene Location: 60968-62527 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 61373-61781 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 61 373-61 781 bp Feature: gene Location: 62883-63599 bp Feature: gene Location: 63709-64413 bp Feature: domain Description: Gly-zipper_YMGG Location: 64201-64318 bp Feature: domain Description: Gly-zipper_YMGG Location: 64201 -6431 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GAF_2 (pfam13185), GGDEF (TIGR00254), RVT-UG7, Gly-zipper_YMGG (pfam13441)

Seq: PLCO01000008.1 Acidobacteriaceae bacterium isolate palsa_249 73.20111000_P3D.47_contig_5168, whole genome shotgun sequence (44535 bp)
Overview 1 RT 1: 36312-43821 bp Neighborhood of RT #1 [36312, 43823] GT87 GT87 RVT-UG3 RVT-UG8 antidote_HigA HigB-like_toxin Feature: gene Location: 36312-37598 bp Feature: domain Description: GT87 Location: 36669-37335 bp Feature: domain Description: GT87 Location: 36669-37335 bp Feature: gene Location: 37913-39073 bp Feature: domain Description: GT87 Location: 38162-38768 bp Feature: domain Description: GT87 Location: 38162 -38768 bp Feature: gene Location: 39561-40856 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 39843-40380 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 39843-40380 bp Feature: gene Location: 40849-42864 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 41371-41818 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 41371-41818 bp Feature: gene Location: 43235-43513 bp Feature: domain Description: antidote_HigA Location: 43250-43472 bp Feature: domain Description: antidote_HigA Location: 432 50-43472 bp Feature: gene Location: 43524-43823 bp Feature: domain Description: HigB-like_toxin Location: 43554-43821 bp Feature: domain Description: HigB-like_toxin Location: 43554-4382 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT87 (pfam09594), RVT-UG3, RVT-UG8, antidote_HigA (TIGR02607), HigB-like_toxin (pfam05015)