myRT

myRT report for GCA_003134995.1_20111000_P2S

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Seq: PLDC01000015.1 Acidobacteriaceae bacterium isolate palsa_246 73.20111000_P2S.3_contig_1, whole genome shotgun sequence (427230 bp)
Overview 1 RT 1: 23586-28395 bp Neighborhood of RT #1 [23586, 28395] DmpA recQ recQ RVT-Retrons RVT-Retrons Feature: gene Location: 23586-24761 bp Feature: domain Description: DmpA Location: 23694-24708 bp Feature: domain Description: DmpA Location: 23694-24708 bp Feature: gene Location: 25133-26668 bp Feature: domain Description: recQ Location: 25166-26342 bp Feature: domain Description: recQ Location: 251 66-26342 bp Feature: domain Description: recQ Location: 26390-26639 bp Feature: domain Description: recQ Location: 26390-26639 bp Feature: gene Location: 26707-27492 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26806-26998 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26806-26998 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27001-27256 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27001 -27256 bp Feature: gene Location: 27489-28193 bp Feature: gene Location: 28267-28395 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DmpA (COG3191), recQ (TIGR01389), RVT-Retrons

Seq: PLDC01000025.1 Acidobacteriaceae bacterium isolate palsa_246 73.20111000_P2S.3_contig_23, whole genome shotgun sequence (551661 bp)
Overview 1 RT 1: 78041-81970 bp Neighborhood of RT #1 [78041, 81970] Cytidylate_kin2 SRAP RVT_N RVT-GII GIIM SRAP Feature: gene Location: 78041-78670 bp Feature: domain Description: Cytidylate_kin2 Location: 78053-78596 bp Feature: domain Description: Cytidylate_kin2 Location: 78053-78596 bp Feature: gene Location: 78720-79172 bp Feature: domain Description: SRAP Location: 78801-79137 bp Feature: domain Description: SRAP Location: 78801-79137 bp Feature: gene Location: 79201-80676 bp Feature: RT Description: RVT_N Location: 79246-79483 bp Feature: RT Description: RVT_N Location: 792 46-79483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79534-80182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79534-80182 bp Feature: domain Description: GIIM Note: maturase Location: 80242-80470 bp Feature: domain Description: GIIM Note: maturase Location: 802 42 -80470 bp Feature: gene Location: 81171-81425 bp Feature: domain Description: SRAP Location: 81174-81342 bp Feature: domain Description: SRAP Location: 81174-81342 bp Feature: gene Location: 81737-81970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cytidylate_kin2 (pfam13189), SRAP (pfam02586), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)