myRT

myRT report for GCA_003135435.1_20111000_P3M

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Seq: PLBR01000041.1 Nitrospira sp. isolate palsa_1310 73.20111000_P3M.58_contig_12181, whole genome shotgun sequence (32109 bp)
Overview 1 RT 1: 17609-23954 bp Neighborhood of RT #1 [17609, 24133] Big_7 PRK05326 RVT-UG19 DUF2513 RhaT Feature: gene Location: 17609-17974 bp Feature: domain Description: Big_7 Location: 17735-17909 bp Feature: domain Description: Big_7 Location: 1 7735-1 7909 bp Feature: gene Location: 18335-19585 bp Feature: domain Description: PRK05326 Location: 18347-19541 bp Feature: domain Description: PRK05326 Location: 1 8347-1 9541 bp Feature: gene Location: 20270-22348 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 20636-21122 bp Feature: RT Description: RVT-UG1 9 Note: UG1 9 RT Location: 20636-21 1 22 bp Feature: gene Location: 22554-22916 bp Feature: domain Description: DUF2513 Location: 22560-22851 bp Feature: domain Description: DUF251 3 Location: 22560-22851 bp Feature: gene Location: 23075-24133 bp Feature: domain Description: RhaT Location: 23096-23954 bp Feature: domain Description: RhaT Location: 23096-23954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Big_7 (pfam17957), PRK05326 (potassium/proton antiporter), RVT-UG19, DUF2513 (pfam10711), RhaT (TIGR00776)

Seq: PLBR01000115.1 Nitrospira sp. isolate palsa_1310 73.20111000_P3M.58_contig_43220, whole genome shotgun sequence (10306 bp)
Overview 1 RT 1: 6839-10220 bp Neighborhood of RT #1 [6839, 10279] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 6839-7126 bp Feature: domain Description: InsE Location: 6851-7121 bp Feature: domain Description: InsE Location: 6851-712 1 bp Feature: gene Location: 7123-7569 bp Feature: domain Description: PHA02517 Location: 7189-7537 bp Feature: domain Description: PHA02 517 Location: 7189-7537 bp Feature: gene Location: 8196-9728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8469-9207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8469-92 07 bp Feature: domain Description: GIIM Note: maturase Location: 9303-9480 bp Feature: domain Description: GIIM Note: maturase Location: 9303-9480 bp Feature: gene Location: 9854-10279 bp Feature: domain Description: PHA02517 Location: 9860-10220 bp Feature: domain Description: PHA02 517 Location: 9860-102 2 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)