myRT

myRT report for GCA_003136115.1_20120600_P3S

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Seq: PNBQ01000280.1 Acidobacteriaceae bacterium isolate palsa_314 73.20120600_P3S.4_contig_2303, whole genome shotgun sequence (56237 bp)
Overview 1 RT 1: 42689-46463 bp Neighborhood of RT #1 [42689, 46537] SRAP RVT_N RVT-GII GIIM SRAP Cytidylate_kin2 Feature: gene Location: 42689-42877 bp Feature: gene Location: 43027-43446 bp Feature: domain Description: SRAP Location: 43030-43363 bp Feature: domain Description: SRAP Location: 43030-43363 bp Feature: gene Location: 43941-45416 bp Feature: RT Description: RVT_N Location: 43986-44223 bp Feature: RT Description: RVT_N Location: 43986-44223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44274-44922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44274-44922 bp Feature: domain Description: GIIM Note: maturase Location: 44982-45210 bp Feature: domain Description: GIIM Note: maturase Location: 44982-4521 0 bp Feature: gene Location: 45403-45897 bp Feature: domain Description: SRAP Location: 45526-45862 bp Feature: domain Description: SRAP Location: 45526-45862 bp Feature: gene Location: 45947-46537 bp Feature: domain Description: Cytidylate_kin2 Location: 45995-46463 bp Feature: domain Description: Cytidylate_kin2 Location: 45995-46463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SRAP (pfam02586), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Cytidylate_kin2 (pfam13189)

Seq: PNBQ01000177.1 Acidobacteriaceae bacterium isolate palsa_314 73.20120600_P3S.4_contig_5325, whole genome shotgun sequence (8072 bp)
Overview 1 RT 1: 5014-8040 bp Neighborhood of RT #1 [5014, 8069] RVT-Retrons RVT-Retrons recQ recQ Feature: gene Location: 5014-5142 bp Feature: gene Location: 5216-5920 bp Feature: gene Location: 5917-6702 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6016-6208 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6016-62 08 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6211-6466 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 62 11-6466 bp Feature: gene Location: 6741-8069 bp Feature: domain Description: recQ Location: 6744-7743 bp Feature: domain Description: recQ Location: 6744-7743 bp Feature: domain Description: recQ Location: 7791-8040 bp Feature: domain Description: recQ Location: 7791-8040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, recQ (TIGR01389)