myRT

myRT report for GCA_003136255.1_20111000_P1S

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Seq: PLDT01000011.1 Actinobacteria bacterium isolate palsa_599 73.20111000_P1S.6_contig_31278, whole genome shotgun sequence (3053 bp)
Overview 1 RT 1: 3-2296 bp Neighborhood of RT #1 [3, 2436] DDE_Tnp_IS66 RVT-GII GIIM Feature: gene Location: 3-767 bp Feature: domain Description: DDE_Tnp_IS66 Location: 99-621 bp Feature: domain Description: DDE_Tnp_IS66 Location: 99-621 bp Feature: gene Location: 973-2436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1309-2005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 309-2005 bp Feature: domain Description: GIIM Note: maturase Location: 2074-2296 bp Feature: domain Description: GIIM Note: maturase Location: 2074-2296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)

Seq: PLDT01000024.1 Actinobacteria bacterium isolate palsa_599 73.20111000_P1S.6_contig_7467, whole genome shotgun sequence (2597 bp)
Overview 1 RT 1: 400-2595 bp Neighborhood of RT #1 [400, 2595] RVT-GII Intron_maturas2 Feature: gene Location: 400-2175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661-1456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661-1456 bp Feature: domain Description: Intron_maturas2 Location: 1558-1792 bp Feature: domain Description: Intron_maturas2 Location: 1558-1792 bp Feature: gene Location: 2218-2364 bp Feature: gene Location: 2380-2595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: PLDT01000617.1 Actinobacteria bacterium isolate palsa_599 73.20111000_P1S.6_contig_983, whole genome shotgun sequence (14721 bp)
Overview 1 RT 1: 4224-8324 bp Neighborhood of RT #1 [4224, 8324] VOC_like LanC_like RVT-GII GIIM Feature: gene Location: 4224-4712 bp Feature: domain Description: VOC_like Location: 4257-4596 bp Feature: domain Description: VOC_like Location: 4257-4596 bp Feature: gene Location: 4746-5318 bp Feature: domain Description: LanC_like Location: 4755-5247 bp Feature: domain Description: LanC_like Location: 4755-5247 bp Feature: gene Location: 6055-7317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6271-6931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6271-693 1 bp Feature: domain Description: GIIM Note: maturase Location: 7009-7240 bp Feature: domain Description: GIIM Note: maturase Location: 7009-7240 bp Feature: gene Location: 7525-7743 bp Feature: gene Location: 8070-8324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VOC_like (cd16355), LanC_like (cl04955), RVT-GII, GIIM (pfam08388)