myRT

myRT report for GCA_003136575.1_20110800_S3S

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Seq: PLEX01000180.1 Bryobacterales bacterium isolate bog_234 73.20110800_S3S.41_contig_10065, whole genome shotgun sequence (44642 bp)
Overview 1 RT 1: 41670-44555 bp Neighborhood of RT #1 [41670, 44578] VCBS VCBS VCBS VCBS UnbV_ASPIC Tropomyosin RVT-DGRs Avd_like Feature: gene Location: 41670-43328 bp Feature: domain Description: VCBS Location: 41850-42066 bp Feature: domain Description: VCBS Location: 41 850-42066 bp Feature: domain Description: VCBS Location: 42318-42456 bp Feature: domain Description: VCBS Location: 4231 8-42456 bp Feature: domain Description: VCBS Location: 42606-42801 bp Feature: domain Description: VCBS Location: 42606-42801 bp Feature: domain Description: VCBS Location: 42870-43005 bp Feature: domain Description: VCBS Location: 42870-43005 bp Feature: domain Description: UnbV_ASPIC Location: 43107-43311 bp Feature: domain Description: UnbV_ASPIC Location: 431 07-4331 1 bp Feature: gene Location: 43396-43707 bp Feature: domain Description: Tropomyosin Location: 43540-43693 bp Feature: domain Description: Tropomyosin Location: 43540-43693 bp Feature: gene Location: 43748-44116 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 43856-44102 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 43856-441 02 bp Feature: gene Location: 44210-44578 bp Feature: domain Description: Avd_like Location: 44252-44555 bp Feature: domain Description: Avd_like Location: 44252-44555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VCBS (pfam13517), UnbV_ASPIC (pfam07593), Tropomyosin (pfam00261), RVT-DGRs, Avd_like (cd16376)

Seq: PLEX01000080.1 Bryobacterales bacterium isolate bog_234 73.20110800_S3S.41_contig_13847, whole genome shotgun sequence (36594 bp)
Overview 1 RT 1: 3-3598 bp Neighborhood of RT #1 [3, 3598] PRK12904 RVT-GII RVT-GII Feature: gene Location: 3-467 bp Feature: domain Description: PRK12904 Location: 6-468 bp Feature: domain Description: PRK12 904 Location: 6-468 bp Feature: gene Location: 499-1071 bp Feature: gene Location: 1418-1780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1451-1592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1451-1592 bp Feature: gene Location: 2089-2622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2101-2461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 101-2 461 bp Feature: gene Location: 2699-2998 bp Feature: gene Location: 3116-3598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK12904 (preprotein translocase subunit SecA; Reviewed)

Seq: PLEX01000073.1 Bryobacterales bacterium isolate bog_234 73.20110800_S3S.41_contig_14313, whole genome shotgun sequence (28568 bp)
Overview 1 RT 1: 25921-28539 bp Neighborhood of RT #1 [25921, 28565] PRK05420 RVT-DGRs Avd_like Feature: gene Location: 25921-26652 bp Feature: domain Description: PRK05420 Location: 25933-26611 bp Feature: domain Description: PRK05420 Location: 2593 3 -26611 bp Feature: gene Location: 26750-27037 bp Feature: gene Location: 27052-28119 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 27256-27901 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 27256-27901 bp Feature: gene Location: 28116-28565 bp Feature: domain Description: Avd_like Location: 28239-28539 bp Feature: domain Description: Avd_like Location: 2823 9-2853 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05420 (aquaporin Z; Provisional), RVT-DGRs, Avd_like (cd16376)

Seq: PLEX01000196.1 Bryobacterales bacterium isolate bog_234 73.20110800_S3S.41_contig_3103, whole genome shotgun sequence (38662 bp)
Overview 1 RT 1: 27381-30444 bp Neighborhood of RT #1 [27381, 31145] nagB RVT-GII HAF_rpt HAF_rpt HAF_rpt Tyrosinase Tyrosinase Feature: gene Location: 27381-28118 bp Feature: domain Description: nagB Location: 27384-28113 bp Feature: domain Description: nagB Location: 27384 -28113 bp Feature: gene Location: 28310-28492 bp Feature: gene Location: 28501-28701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28522-28672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28522-28672 bp Feature: gene Location: 28898-29557 bp Feature: domain Description: HAF_rpt Location: 29039-29129 bp Feature: domain Description: HAF_rpt Location: 29039-29129 bp Feature: domain Description: HAF_rpt Location: 29153-29192 bp Feature: domain Description: HAF_rpt Location: 29153-29192 bp Feature: domain Description: HAF_rpt Location: 29363-29429 bp Feature: domain Description: HAF_rpt Location: 29363-294 29 bp Feature: gene Location: 29700-31145 bp Feature: domain Description: Tyrosinase Location: 29949-30123 bp Feature: domain Description: Tyrosinase Location: 2994 9-30123 bp Feature: domain Description: Tyrosinase Location: 30243-30444 bp Feature: domain Description: Tyrosinase Location: 3024 3-304 4 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nagB (TIGR00502), RVT-GII, HAF_rpt (TIGR02913), Tyrosinase (pfam00264)

Seq: PLEX01000030.1 Bryobacterales bacterium isolate bog_234 73.20110800_S3S.41_contig_3225, whole genome shotgun sequence (74667 bp)
Overview 1 RT 1: 29-3003 bp Neighborhood of RT #1 [29, 3003] RVT-GII GIIM DUF2214 Feature: gene Location: 29-1417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 326-959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 326-95 9 bp Feature: domain Description: GIIM Note: maturase Location: 1037-1241 bp Feature: domain Description: GIIM Note: maturase Location: 1037-1241 bp Feature: gene Location: 1939-2634 bp Feature: domain Description: DUF2214 Location: 2029-2290 bp Feature: domain Description: DUF2214 Location: 2029-2290 bp Feature: gene Location: 2644-3003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2214 (pfam09980), RVT-GII, GIIM (pfam08388)

Seq: PLEX01000098.1 Bryobacterales bacterium isolate bog_234 73.20110800_S3S.41_contig_5961, whole genome shotgun sequence (20756 bp)
Overview 1 RT 1: 18695-20487 bp Neighborhood of RT #1 [18695, 20487] group_II_RT_mat RVT-GII Feature: gene Location: 18695-19255 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 18701-19064 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 18701-1906 4 bp Feature: gene Location: 19315-19551 bp Feature: gene Location: 19734-20150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20073-20145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20073-20145 bp Feature: gene Location: 20269-20487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII

Seq: PLEX01000115.1 Bryobacterales bacterium isolate bog_234 73.20110800_S3S.41_contig_8468, whole genome shotgun sequence (21764 bp)
Overview 1 RT 1: 122-1782 bp Neighborhood of RT #1 [122, 2120] RVT-DGRs Avd_like YfmG Feature: gene Location: 122-1204 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 335-983 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 335-983 bp Feature: gene Location: 1203-1562 bp Feature: domain Description: Avd_like Location: 1224-1536 bp Feature: domain Description: Avd_like Location: 1224-1536 bp Feature: gene Location: 1605-2120 bp Feature: domain Description: YfmG Location: 1659-1782 bp Feature: domain Description: YfmG Location: 1659-17 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, YfmG (COG1262)