myRT

myRT report for GCA_003136755.1_20110800_S3M

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Seq: PLFJ01000200.1 Verrucomicrobiales bacterium isolate bog_1407 73.20110800_S3M.43_contig_31568, whole genome shotgun sequence (15611 bp)
Overview 1 RT 1: 8317-11551 bp Neighborhood of RT #1 [8317, 11551] PinE RVT-GII GIIM Feature: gene Location: 8317-8991 bp Feature: domain Description: PinE Location: 8368-8944 bp Feature: domain Description: PinE Location: 8368-8944 bp Feature: gene Location: 9193-9387 bp Feature: gene Location: 9497-10324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9503-9896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9503-9896 bp Feature: domain Description: GIIM Note: maturase Location: 9941-10172 bp Feature: domain Description: GIIM Note: maturase Location: 9941 -1 01 72 bp Feature: gene Location: 10508-11047 bp Feature: gene Location: 11330-11551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388)

Seq: PLFJ01000257.1 Verrucomicrobiales bacterium isolate bog_1407 73.20110800_S3M.43_contig_8243, whole genome shotgun sequence (9782 bp)
Overview 1 RT 1: 2614-8494 bp Neighborhood of RT #1 [2614, 8494] dnaG dnaG group_II_RT_mat RVT-UG6 nitrilase Feature: gene Location: 2614-2790 bp Feature: gene Location: 2794-3846 bp Feature: domain Description: dnaG Location: 2887-3289 bp Feature: domain Description: dnaG Location: 2 887-32 89 bp Feature: domain Description: dnaG Location: 3529-3832 bp Feature: domain Description: dnaG Location: 352 9-3832 bp Feature: gene Location: 3843-7097 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3879-4209 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3879-42 09 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 4500-4935 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 4500-4935 bp Feature: gene Location: 7087-8028 bp Feature: domain Description: nitrilase Location: 7195-7828 bp Feature: domain Description: nitrilase Location: 7195-782 8 bp Feature: gene Location: 8198-8494 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaG (TIGR01391), group_II_RT_mat (TIGR04416), RVT-UG6, nitrilase (cl11424)