myRT

myRT report for GCA_003136855.1_20111000_P1S

Download annotations/find similar RTs

Seq: PLDV01000019.1 Acidobacteriaceae bacterium isolate palsa_238 73.20111000_P1S.4_contig_190, whole genome shotgun sequence (422591 bp)
Overview 1 RT 1: 19101-23910 bp Neighborhood of RT #1 [19101, 23910] DmpA recQ recQ RVT-Retrons RVT-Retrons Feature: gene Location: 19101-20276 bp Feature: domain Description: DmpA Location: 19209-20223 bp Feature: domain Description: DmpA Location: 1 9209-20223 bp Feature: gene Location: 20648-22183 bp Feature: domain Description: recQ Location: 20681-21857 bp Feature: domain Description: recQ Location: 20681 -21 857 bp Feature: domain Description: recQ Location: 21905-22154 bp Feature: domain Description: recQ Location: 21 905-221 54 bp Feature: gene Location: 22222-23007 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22321-22513 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22321 -2251 3 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22516-22771 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2251 6-22771 bp Feature: gene Location: 23004-23708 bp Feature: gene Location: 23782-23910 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: PLDV01000020.1 Acidobacteriaceae bacterium isolate palsa_238 73.20111000_P1S.4_contig_8633, whole genome shotgun sequence (6736 bp)
Overview 1 RT 1: 37-3892 bp Neighborhood of RT #1 [37, 3966] SRAP RVT_N RVT-GII GIIM SRAP Cytidylate_kin2 Feature: gene Location: 37-270 bp Feature: gene Location: 417-836 bp Feature: domain Description: SRAP Location: 420-753 bp Feature: domain Description: SRAP Location: 42 0-753 bp Feature: gene Location: 1331-2806 bp Feature: RT Description: RVT_N Location: 1376-1613 bp Feature: RT Description: RVT_N Location: 1376-1613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1664-2312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1664-2 312 bp Feature: domain Description: GIIM Note: maturase Location: 2372-2600 bp Feature: domain Description: GIIM Note: maturase Location: 2 372 -2 600 bp Feature: gene Location: 2793-3287 bp Feature: domain Description: SRAP Location: 2916-3252 bp Feature: domain Description: SRAP Location: 2 916-32 52 bp Feature: gene Location: 3337-3966 bp Feature: domain Description: Cytidylate_kin2 Location: 3349-3892 bp Feature: domain Description: Cytidylate_kin2 Location: 3349-3892 bp Sorry, your browser does not support inline SVG.
Associated domains: