myRT

myRT report for GCA_003137915.1_ASM313791v1

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Seq: PZKW01000028.1 Salmonella enterica subsp. enterica serovar Typhi strain ST11 NODE_28_length_43460_cov_56.8293, whole genome shotgun sequence (43460 bp)
Overview 1 RT 1: 3-5185 bp Neighborhood of RT #1 [3, 5232] PRK09678 RVT-UG11 type_I_hlyD type_I_hlyD type_I_sec_LssB Feature: gene Location: 3-161 bp Feature: domain Description: PRK09678 Location: 12-144 bp Feature: domain Description: PRK09678 Location: 1 2-1 44 bp Feature: gene Location: 408-596 bp Feature: gene Location: 565-1338 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 700-1153 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 700-1 1 53 bp Feature: gene Location: 1881-3071 bp Feature: domain Description: type_I_hlyD Location: 1962-2406 bp Feature: domain Description: type_I_hlyD Location: 1 962-2406 bp Feature: domain Description: type_I_hlyD Location: 2445-3069 bp Feature: domain Description: type_I_hlyD Location: 2445-3069 bp Feature: gene Location: 3052-5232 bp Feature: domain Description: type_I_sec_LssB Location: 3112-5185 bp Feature: domain Description: type_I_sec_LssB Location: 31 1 2-51 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, type_I_hlyD (TIGR01843), type_I_sec_LssB (TIGR03375)

Seq: PZKW01000009.1 Salmonella enterica subsp. enterica serovar Typhi strain ST11 NODE_9_length_201606_cov_54.3304, whole genome shotgun sequence (201606 bp)
Overview 1 RT 1: 106924-112398 bp Neighborhood of RT #1 [106924, 112622] DDE_Tnp_1 RVT-GII met_A_Alw26 Feature: gene Location: 106924-107838 bp Feature: domain Description: DDE_Tnp_1 Location: 106984-107554 bp Feature: domain Description: DDE_Tnp_1 Location: 106984-107554 bp Feature: gene Location: 107868-108020 bp Feature: gene Location: 108859-109293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108865-109153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108865-109153 bp Feature: gene Location: 109781-110377 bp Feature: gene Location: 110370-112622 bp Feature: domain Description: met_A_Alw26 Location: 110697-112398 bp Feature: domain Description: met_A_Alw2 6 Location: 110697-112 398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, met_A_Alw26 (TIGR02987)