myRT

myRT report for GCA_003138365.1_20110800_S3D

Download annotations/find similar RTs

Seq: PLFY01000195.1 Acidobacteriaceae bacterium isolate bog_226 73.20110800_S3D.6_contig_1724, whole genome shotgun sequence (15134 bp)
Overview 1 RT 1: 3112-6601 bp Neighborhood of RT #1 [3112, 6603] RVT-UG7 PRK09812 MazE Feature: gene Location: 3112-3414 bp Feature: gene Location: 3443-4180 bp Feature: gene Location: 4285-5850 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 4669-5095 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 4669-5095 bp Feature: gene Location: 6062-6388 bp Feature: domain Description: PRK09812 Location: 6068-6386 bp Feature: domain Description: PRK0981 2 Location: 6068-6386 bp Feature: gene Location: 6385-6603 bp Feature: domain Description: MazE Location: 6394-6601 bp Feature: domain Description: MazE Location: 6394-6601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09812 (type II toxin-antitoxin system ChpB family toxin), MazE (COG2336)

Seq: PLFY01000133.1 Acidobacteriaceae bacterium isolate bog_226 73.20110800_S3D.6_contig_475, whole genome shotgun sequence (115111 bp)
Overview 1 RT 1: 80155-85214 bp Neighborhood of RT #1 [80155, 85214] RelB zf-UBP RVT-UG16 RpsA PRK00087 Feature: gene Location: 80155-80421 bp Feature: domain Description: RelB Location: 80167-80410 bp Feature: domain Description: RelB Location: 80167-80410 bp Feature: gene Location: 80925-81185 bp Feature: domain Description: zf-UBP Location: 80991-81180 bp Feature: domain Description: zf-UBP Location: 80991-81180 bp Feature: gene Location: 81217-82632 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 81499-81904 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 81499-81904 bp Feature: gene Location: 82774-84495 bp Feature: domain Description: RpsA Location: 82840-83890 bp Feature: domain Description: RpsA Location: 82 840-83890 bp Feature: domain Description: PRK00087 Location: 84028-84484 bp Feature: domain Description: PRK00087 Location: 8402 8-84484 bp Feature: gene Location: 84747-85214 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB (pfam04221), zf-UBP (pfam02148), RVT-UG16, RpsA (COG0539), PRK00087 (bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1)