myRT

myRT report for GCA_003138755.1_20110800_S2M

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Seq: PLGZ01000031.1 Verrucomicrobia subdivision 3 bacterium isolate bog_1403 73.20110800_S2M.10_contig_13820, whole genome shotgun sequence (4987 bp)
Overview 1 RT 1: 3236-4598 bp Neighborhood of RT #1 [3236, 4873] RVT-GII group_II_RT_mat Feature: gene Location: 3236-3484 bp Feature: gene Location: 3980-4849 bp Feature: gene Location: 3926-4873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3929-4334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3929-4334 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4436-4598 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4436-4598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)

Seq: PLGZ01000169.1 Verrucomicrobia subdivision 3 bacterium isolate bog_1403 73.20110800_S2M.10_contig_1475, whole genome shotgun sequence (24109 bp)
Overview 1 RT 1: 18087-21129 bp Neighborhood of RT #1 [18087, 21129] HTH_XRE RVT_N RVT-GII GIIM Feature: gene Location: 18087-18272 bp Feature: gene Location: 18304-18705 bp Feature: domain Description: HTH_XRE Location: 18529-18691 bp Feature: domain Description: HTH_XRE Location: 1852 9-18691 bp Feature: gene Location: 18836-20344 bp Feature: RT Description: RVT_N Location: 18887-19130 bp Feature: RT Description: RVT_N Location: 18887-19130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19175-19820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19175-1982 0 bp Feature: domain Description: GIIM Note: maturase Location: 19880-20108 bp Feature: domain Description: GIIM Note: maturase Location: 19880-2 0108 bp Feature: gene Location: 20429-20701 bp Feature: gene Location: 20944-21129 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: PLGZ01000175.1 Verrucomicrobia subdivision 3 bacterium isolate bog_1403 73.20110800_S2M.10_contig_80, whole genome shotgun sequence (81908 bp)
Overview 1 RT 1: 57049-60486 bp Neighborhood of RT #1 [57049, 60486] KdpC RVT-GII GIIM Feature: gene Location: 57049-57672 bp Feature: domain Description: KdpC Location: 57067-57622 bp Feature: domain Description: KdpC Location: 57067-57622 bp Feature: gene Location: 58119-58289 bp Feature: gene Location: 58325-59209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58331-58685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583 3 1-58685 bp Feature: domain Description: GIIM Note: maturase Location: 58745-58973 bp Feature: domain Description: GIIM Note: maturase Location: 58745-58973 bp Feature: gene Location: 59476-59607 bp Feature: gene Location: 60199-60486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KdpC (pfam02669), RVT-GII, GIIM (pfam08388)