myRT

myRT report for GCA_003139165.1_20110800_S1M

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Seq: PLIA01000058.1 Bryobacterales bacterium isolate bog_204 73.20110800_S1M.34_contig_3779, whole genome shotgun sequence (28815 bp)
Overview 1 RT 1: 23259-28566 bp Neighborhood of RT #1 [23259, 28566] PIN_VapC4-5_FitB-like ADOP RVT-Retrons Feature: gene Location: 23259-23648 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 23277-23637 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 23277-23637 bp Feature: gene Location: 23981-26590 bp Feature: domain Description: ADOP Location: 24146-26582 bp Feature: domain Description: ADOP Location: 241 46-26582 bp Feature: gene Location: 26475-27806 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26931-27576 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26931 -27576 bp Feature: gene Location: 28077-28244 bp Feature: gene Location: 28375-28566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_VapC4-5_FitB-like (cd18754), ADOP (TIGR03434), RVT-Retrons

Seq: PLIA01000333.1 Bryobacterales bacterium isolate bog_204 73.20110800_S1M.34_contig_3907, whole genome shotgun sequence (20578 bp)
Overview 1 RT 1: 3-1946 bp Neighborhood of RT #1 [3, 1946] RVT-CRISPR Cas_Cas1 Feature: gene Location: 3-1355 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 207-801 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 07-801 bp Feature: domain Description: Cas_Cas1 Location: 1020-1350 bp Feature: domain Description: Cas_Cas1 Location: 102 0-1350 bp Feature: gene Location: 1362-1622 bp Feature: gene Location: 921-1946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas_Cas1 (pfam01867)