myRT

myRT report for GCA_003139255.1_20110800_S1D

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Seq: PLIG01000205.1 Acidimicrobiaceae bacterium isolate bog_564 73.20110800_S1D.50_contig_1271, whole genome shotgun sequence (99896 bp)
Overview 1 RT 1: 2-3226 bp Neighborhood of RT #1 [2, 3226] Phage_int_SAM_1 Phage_int_SAM_1 RVT-GII GIIM PRK07791 Feature: gene Location: 2-643 bp Feature: domain Description: Phage_int_SAM_1 Location: 104-248 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 04-248 bp Feature: domain Description: Phage_int_SAM_1 Location: 335-569 bp Feature: domain Description: Phage_int_SAM_1 Location: 335-569 bp Feature: gene Location: 803-1375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806-977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806-977 bp Feature: domain Description: GIIM Note: maturase Location: 1061-1280 bp Feature: domain Description: GIIM Note: maturase Location: 1 061 -1 280 bp Feature: gene Location: 1491-2522 bp Feature: domain Description: PRK07791 Location: 1620-2463 bp Feature: domain Description: PRK07791 Location: 1 620-2463 bp Feature: gene Location: 2612-3226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07791 (short chain dehydrogenase; Provisional), Phage_int_SAM_1 (pfam02899), RVT-GII, GIIM (pfam08388)

Seq: PLIG01000132.1 Acidimicrobiaceae bacterium isolate bog_564 73.20110800_S1D.50_contig_45348, whole genome shotgun sequence (8397 bp)
Overview 1 RT 1: 5595-8200 bp Neighborhood of RT #1 [5595, 8340] TANGO2 RVT-GII GIIM Feature: gene Location: 5595-5738 bp Feature: gene Location: 5751-6539 bp Feature: domain Description: TANGO2 Location: 5754-6453 bp Feature: domain Description: TANGO2 Location: 5754-6453 bp Feature: gene Location: 6904-8340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7216-7900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 16-7900 bp Feature: domain Description: GIIM Note: maturase Location: 7975-8200 bp Feature: domain Description: GIIM Note: maturase Location: 7975-82 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TANGO2 (pfam05742), RVT-GII, GIIM (pfam08388)

Seq: PLIG01000134.1 Acidimicrobiaceae bacterium isolate bog_564 73.20110800_S1D.50_contig_751, whole genome shotgun sequence (10746 bp)
Overview 1 RT 1: 3-2241 bp Neighborhood of RT #1 [3, 2276] RVT-GII SAV4209_like MaoC_dehydrat_N Feature: gene Location: 3-527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51-528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51-528 bp Feature: gene Location: 1334-1777 bp Feature: domain Description: SAV4209_like Location: 1388-1754 bp Feature: domain Description: SAV4209_like Location: 13 88-1754 bp Feature: gene Location: 1779-2276 bp Feature: domain Description: MaoC_dehydrat_N Location: 1806-2241 bp Feature: domain Description: MaoC_dehydrat_N Location: 1806-2241 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SAV4209_like (cd03453), MaoC_dehydrat_N (pfam13452), RVT-GII