myRT

myRT report for GCA_003139735.1_20110800_S3D

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Seq: PLGA01000133.1 Bryobacterales bacterium isolate bog_224 73.20110800_S3D.58_contig_16141, whole genome shotgun sequence (13822 bp)
Overview 1 RT 1: 5221-10091 bp Neighborhood of RT #1 [5221, 10102] LamB_YcsF RicinB_lectin_2 RicinB_lectin_2 RVT-GII group_II_RT_mat QueG KOG0805 Feature: gene Location: 5221-5886 bp Feature: domain Description: LamB_YcsF Location: 5251-5875 bp Feature: domain Description: LamB_YcsF Location: 5251 -5875 bp Feature: gene Location: 5914-7155 bp Feature: domain Description: RicinB_lectin_2 Location: 5923-6154 bp Feature: domain Description: RicinB_lectin_2 Location: 5923-61 54 bp Feature: domain Description: RicinB_lectin_2 Location: 6187-6358 bp Feature: domain Description: RicinB_lectin_2 Location: 61 87-6358 bp Feature: gene Location: 7439-8128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7451-7772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7451 -7772 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 7805-8012 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 7805-801 2 bp Feature: gene Location: 8210-8839 bp Feature: domain Description: QueG Location: 8228-8654 bp Feature: domain Description: QueG Location: 8228-8654 bp Feature: gene Location: 9104-10102 bp Feature: domain Description: KOG0805 Location: 9251-10091 bp Feature: domain Description: KOG0805 Location: 9251 -1 0091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LamB_YcsF (pfam03746), RicinB_lectin_2 (pfam14200), RVT-GII, group_II_RT_mat (TIGR04416), QueG (COG1600), KOG0805 (KOG0805, Carbon-nitrogen hydrolase )

Seq: PLGA01000567.1 Bryobacterales bacterium isolate bog_224 73.20110800_S3D.58_contig_17201, whole genome shotgun sequence (20911 bp)
Overview 1 RT 1: 2-3560 bp Neighborhood of RT #1 [2, 3574] RVT-CRISPR Cas1_I-C Cas2_I_II_III PRK00016 TlyC Feature: gene Location: 2-1981 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 8-569 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 8-569 bp Feature: domain Description: Cas1_I-C Location: 806-1784 bp Feature: domain Description: Cas1_I-C Location: 806-1784 bp Feature: domain Description: Cas2_I_II_III Location: 1796-1982 bp Feature: domain Description: Cas2 _I_II_III Location: 1796-1982 bp Feature: gene Location: 1905-2312 bp Feature: domain Description: PRK00016 Location: 2094-2286 bp Feature: domain Description: PRK00016 Location: 2 094-2 2 86 bp Feature: gene Location: 2309-3574 bp Feature: domain Description: TlyC Location: 2633-3560 bp Feature: domain Description: TlyC Location: 2 633-3560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-C (cd09721), Cas2_I_II_III (cl11442), PRK00016 (metal-binding heat shock protein; Provisional), TlyC (COG1253)