myRT

myRT report for GCA_003139875.1_20110800_S2D

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Seq: PLHA01000250.1 Acidobacteriaceae bacterium isolate bog_212 73.20110800_S2D.6_contig_173, whole genome shotgun sequence (51706 bp)
Overview 1 RT 1: 37891-42950 bp Neighborhood of RT #1 [37891, 42950] RelB zf-UBP RVT-UG16 RpsA PRK00087 Feature: gene Location: 37891-38157 bp Feature: domain Description: RelB Location: 37903-38146 bp Feature: domain Description: RelB Location: 37903-381 46 bp Feature: gene Location: 38661-38921 bp Feature: domain Description: zf-UBP Location: 38727-38916 bp Feature: domain Description: zf-UBP Location: 38727-3891 6 bp Feature: gene Location: 38953-40368 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 39235-39640 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 39235-39640 bp Feature: gene Location: 40510-42231 bp Feature: domain Description: RpsA Location: 40576-41626 bp Feature: domain Description: RpsA Location: 40576-41 626 bp Feature: domain Description: PRK00087 Location: 41764-42220 bp Feature: domain Description: PRK00087 Location: 41 764-42220 bp Feature: gene Location: 42483-42950 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB (pfam04221), zf-UBP (pfam02148), RVT-UG16, RpsA (COG0539), PRK00087 (bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1)

Seq: PLHA01000124.1 Acidobacteriaceae bacterium isolate bog_212 73.20110800_S2D.6_contig_1843, whole genome shotgun sequence (9220 bp)
Overview 1 RT 1: 3424-6982 bp Neighborhood of RT #1 [3424, 6984] RVT-UG7 PRK09812 MazE Feature: gene Location: 3424-3726 bp Feature: gene Location: 3755-4510 bp Feature: gene Location: 4666-6231 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 5050-5476 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 5050-5476 bp Feature: gene Location: 6443-6769 bp Feature: domain Description: PRK09812 Location: 6449-6767 bp Feature: domain Description: PRK09812 Location: 6449-6767 bp Feature: gene Location: 6766-6984 bp Feature: domain Description: MazE Location: 6775-6982 bp Feature: domain Description: MazE Location: 6775-6982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09812 (type II toxin-antitoxin system ChpB family toxin), MazE (COG2336)