myRT

myRT report for GCA_003140275.1_20110800_P1M

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Seq: PLJQ01000207.1 Verrucomicrobia subdivision 3 bacterium isolate palsa_1396 73.20110800_P1M.49_contig_2202, whole genome shotgun sequence (17268 bp)
Overview 1 RT 1: 11702-14629 bp Neighborhood of RT #1 [11702, 14629] VWA_3 RVT-GII GIIM Feature: gene Location: 11702-12751 bp Feature: domain Description: VWA_3 Location: 11810-12254 bp Feature: domain Description: VWA_3 Location: 1 1 81 0-1 2254 bp Feature: gene Location: 12771-12959 bp Feature: gene Location: 13188-13970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13191-13449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 91 -1 3449 bp Feature: domain Description: GIIM Note: maturase Location: 13506-13734 bp Feature: domain Description: GIIM Note: maturase Location: 1 3506-1 3734 bp Feature: gene Location: 14031-14426 bp Feature: gene Location: 14471-14629 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VWA_3 (pfam13768), RVT-GII, GIIM (pfam08388)

Seq: PLJQ01000410.1 Verrucomicrobia subdivision 3 bacterium isolate palsa_1396 73.20110800_P1M.49_contig_40356, whole genome shotgun sequence (8647 bp)
Overview 1 RT 1: 2639-7802 bp Neighborhood of RT #1 [2639, 7810] CelB RVT-UG7 KOG3698 KOG3698 KOG3698 Feature: gene Location: 2639-3898 bp Feature: domain Description: CelB Location: 2642-3887 bp Feature: domain Description: CelB Location: 2 642 -3887 bp Feature: gene Location: 3917-4057 bp Feature: gene Location: 4188-5711 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 4566-4989 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 4566-4989 bp Feature: gene Location: 5818-7182 bp Feature: domain Description: KOG3698 Location: 5830-6673 bp Feature: domain Description: KOG3698 Location: 5830-6673 bp Feature: domain Description: KOG3698 Location: 6736-7138 bp Feature: domain Description: KOG3698 Location: 6736-7138 bp Feature: gene Location: 7064-7810 bp Feature: domain Description: KOG3698 Location: 7208-7802 bp Feature: domain Description: KOG3698 Location: 72 08-7802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CelB (COG1455), RVT-UG7, KOG3698 (KOG3698, Hyaluronoglucosaminidase )