myRT

myRT report for GCA_003140295.1_20110800_P1M

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Seq: PLJR01000101.1 Acidobacteria bacterium isolate palsa_189 73.20110800_P1M.47_contig_24528, whole genome shotgun sequence (8684 bp)
Overview 1 RT 1: 2390-8550 bp Neighborhood of RT #1 [2390, 8600] TagH Wzt_C-like Tra5 RVT-GII COG1233 Feature: gene Location: 2390-3688 bp Feature: domain Description: TagH Location: 2405-3179 bp Feature: domain Description: TagH Location: 2405-31 79 bp Feature: domain Description: Wzt_C-like Location: 3266-3662 bp Feature: domain Description: Wzt_C-like Location: 3266-3662 bp Feature: gene Location: 3922-5187 bp Feature: domain Description: Tra5 Location: 4183-4954 bp Feature: domain Description: Tra5 Location: 41 83-4954 bp Feature: gene Location: 5283-6428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5619-6153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 561 9-61 53 bp Feature: gene Location: 6427-7008 bp Feature: gene Location: 7152-8600 bp Feature: domain Description: COG1233 Location: 7161-8550 bp Feature: domain Description: COG1 233 Location: 71 61 -8550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TagH (COG1134), Wzt_C-like (cl15685), Tra5 (COG2801), RVT-GII, COG1233 (Phytoene dehydrogenase-related protein )

Seq: PLJR01000261.1 Acidobacteria bacterium isolate palsa_189 73.20110800_P1M.47_contig_27118, whole genome shotgun sequence (5109 bp)
Overview 1 RT 1: 600-4049 bp Neighborhood of RT #1 [600, 4993] PepO group_II_RT_mat RVT-UG13 Feature: gene Location: 600-2417 bp Feature: domain Description: PepO Location: 606-2415 bp Feature: domain Description: PepO Location: 606-2 415 bp Feature: gene Location: 2427-2888 bp Feature: gene Location: 3161-4993 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3251-3554 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 32 51-3554 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 3587-4049 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 3587-4049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PepO (COG3590), group_II_RT_mat (TIGR04416), RVT-UG13