myRT

myRT report for GCA_003140315.1_20110800_P1M

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Seq: PLJS01000332.1 Rhizobiales bacterium isolate palsa_894 73.20110800_P1M.44_contig_1048, whole genome shotgun sequence (43621 bp)
Overview 1 RT 1: 3-1703 bp Neighborhood of RT #1 [3, 1703] RVT-GII GIIM Feature: gene Location: 3-599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51-222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 -222 bp Feature: domain Description: GIIM Note: maturase Location: 291-504 bp Feature: domain Description: GIIM Note: maturase Location: 291 -504 bp Feature: gene Location: 618-782 bp Feature: gene Location: 870-1703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PLJS01000162.1 Rhizobiales bacterium isolate palsa_894 73.20110800_P1M.44_contig_15589, whole genome shotgun sequence (5554 bp)
Overview 1 RT 1: 3532-5398 bp Neighborhood of RT #1 [3532, 5553] RVT-UG4 Feature: gene Location: 3532-4359 bp Feature: gene Location: 4436-4798 bp Feature: gene Location: 5170-5553 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5185-5398 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5185-5398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: PLJS01000223.1 Rhizobiales bacterium isolate palsa_894 73.20110800_P1M.44_contig_24615, whole genome shotgun sequence (8484 bp)
Overview 1 RT 1: 2017-6701 bp Neighborhood of RT #1 [2017, 7069] ATPgrasp_ST RVT-UG4 Sulfotransfer_1 HprK_rel_A Feature: gene Location: 2017-3276 bp Feature: domain Description: ATPgrasp_ST Location: 2524-3229 bp Feature: domain Description: ATPgrasp_ST Location: 2524-3 229 bp Feature: gene Location: 3378-3776 bp Feature: gene Location: 3837-4907 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4203-4656 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4203 -4656 bp Feature: gene Location: 5301-6161 bp Feature: domain Description: Sulfotransfer_1 Location: 5325-6141 bp Feature: domain Description: Sulfotransfer_1 Location: 53 25-6141 bp Feature: gene Location: 6158-7069 bp Feature: domain Description: HprK_rel_A Location: 6419-6701 bp Feature: domain Description: HprK_rel_A Location: 6419-6701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ATPgrasp_ST (pfam14397), RVT-UG4, Sulfotransfer_1 (pfam00685), HprK_rel_A (TIGR04352)

Seq: PLJS01000020.1 Rhizobiales bacterium isolate palsa_894 73.20110800_P1M.44_contig_7201, whole genome shotgun sequence (10169 bp)
Overview 1 RT 1: 373-4313 bp Neighborhood of RT #1 [373, 4313] RVT-GII pdxA Feature: gene Location: 373-669 bp Feature: gene Location: 1324-1872 bp Feature: gene Location: 1939-2511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1945-2080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194 5-2080 bp Feature: gene Location: 2808-3812 bp Feature: domain Description: pdxA Location: 2817-3774 bp Feature: domain Description: pdxA Location: 2817-3774 bp Feature: gene Location: 3822-4313 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, pdxA (TIGR00557)