myRT

myRT report for GCA_003141195.1_20120800_E3X

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Seq: PLLC01000057.1 Syntrophaceae bacterium isolate fen_1170 73.20120800_E3X.7_contig_670, whole genome shotgun sequence (49671 bp)
Overview 1 RT 1: 200-4643 bp Neighborhood of RT #1 [200, 4648] DDE_3 HTH_33 RVT-GII GIIM COG4198 Feature: gene Location: 200-754 bp Feature: domain Description: DDE_3 Location: 254-665 bp Feature: domain Description: DDE_3 Location: 254-665 bp Feature: gene Location: 772-1248 bp Feature: domain Description: HTH_33 Location: 1105-1246 bp Feature: domain Description: HTH_33 Location: 1 1 05-1 246 bp Feature: gene Location: 1407-2714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1728-2346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 728-2346 bp Feature: domain Description: GIIM Note: maturase Location: 2397-2601 bp Feature: domain Description: GIIM Note: maturase Location: 2397-2601 bp Feature: gene Location: 2982-3188 bp Feature: gene Location: 3407-4648 bp Feature: domain Description: COG4198 Location: 3419-4643 bp Feature: domain Description: COG41 98 Location: 341 9-4643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358), COG4198 (Uncharacterized conserved protein, DUF1015 family ), HTH_33 (pfam13592)