myRT

myRT report for GCA_003141375.1_20120800_E3S

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Seq: PLLT01000166.1 Syntrophaceae bacterium isolate fen_1169 73.20120800_E3S.7_contig_31774, whole genome shotgun sequence (6360 bp)
Overview 1 RT 1: 1852-6211 bp Neighborhood of RT #1 [1852, 6300] COG4198 RVT-GII GIIM HTH_33 DDE_3 Feature: gene Location: 1852-3093 bp Feature: domain Description: COG4198 Location: 1864-3088 bp Feature: domain Description: COG41 98 Location: 1 864-3088 bp Feature: gene Location: 3312-3518 bp Feature: gene Location: 3786-5093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4107-4725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 07-4725 bp Feature: domain Description: GIIM Note: maturase Location: 4776-4980 bp Feature: domain Description: GIIM Note: maturase Location: 4776-4980 bp Feature: gene Location: 5252-5728 bp Feature: domain Description: HTH_33 Location: 5585-5726 bp Feature: domain Description: HTH_33 Location: 5585-5726 bp Feature: gene Location: 5746-6300 bp Feature: domain Description: DDE_3 Location: 5800-6211 bp Feature: domain Description: DDE_3 Location: 5800-621 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4198 (Uncharacterized conserved protein, DUF1015 family ), RVT-GII, GIIM (pfam08388), HTH_33 (pfam13592), DDE_3 (pfam13358)