myRT

myRT report for GCA_003141415.1_20120800_E3S

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Seq: PLLX01000088.1 Bacteroidales bacterium isolate fen_983 73.20120800_E3S.44_contig_11595, whole genome shotgun sequence (4530 bp)
Overview 1 RT 1: 1329-4320 bp Neighborhood of RT #1 [1329, 4415] BAAT_C RVT-GII GIIM Feature: gene Location: 1329-2315 bp Feature: domain Description: BAAT_C Location: 1713-2235 bp Feature: domain Description: BAAT_C Location: 1 71 3-2235 bp Feature: gene Location: 2510-2896 bp Feature: gene Location: 3156-3803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3369-3798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3369-3798 bp Feature: gene Location: 4056-4415 bp Feature: domain Description: GIIM Note: maturase Location: 4140-4320 bp Feature: domain Description: GIIM Note: maturase Location: 41 40-4320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BAAT_C (pfam08840), RVT-GII, GIIM (pfam08388)

Seq: PLLX01000154.1 Bacteroidales bacterium isolate fen_983 73.20120800_E3S.44_contig_11596, whole genome shotgun sequence (3112 bp)
Overview 1 RT 1: 184-2552 bp Neighborhood of RT #1 [184, 2552] RVT-GII GIIM Feature: gene Location: 184-390 bp Feature: gene Location: 588-1847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1470 bp Feature: domain Description: GIIM Note: maturase Location: 1572-1752 bp Feature: domain Description: GIIM Note: maturase Location: 1572 -1752 bp Feature: gene Location: 2343-2552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PLLX01000197.1 Bacteroidales bacterium isolate fen_983 73.20120800_E3S.44_contig_2977, whole genome shotgun sequence (16819 bp)
Overview 1 RT 1: 1-3987 bp Neighborhood of RT #1 [1, 3987] RVT-GII GIIM Phospholip_B Phospholip_B Feature: gene Location: 1-306 bp Feature: gene Location: 663-1913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 876-1542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 876-1542 bp Feature: domain Description: GIIM Note: maturase Location: 1623-1827 bp Feature: domain Description: GIIM Note: maturase Location: 1623 -1827 bp Feature: gene Location: 2124-3539 bp Feature: domain Description: Phospholip_B Location: 2250-2991 bp Feature: domain Description: Phospholip_B Location: 2250-2991 bp Feature: domain Description: Phospholip_B Location: 3210-3486 bp Feature: domain Description: Phospholip_B Location: 3 210-3 486 bp Feature: gene Location: 3673-3987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Phospholip_B (pfam04916)

Seq: PLLX01000051.1 Bacteroidales bacterium isolate fen_983 73.20120800_E3S.44_contig_33500, whole genome shotgun sequence (6371 bp)
Overview 1 RT 1: 3-2877 bp Neighborhood of RT #1 [3, 2882] HTH_Tnp_1 RVT-GII Fib_succ_major Feature: gene Location: 3-215 bp Feature: gene Location: 248-514 bp Feature: domain Description: HTH_Tnp_1 Location: 254-461 bp Feature: domain Description: HTH_Tnp_1 Location: 254 -4 61 bp Feature: gene Location: 548-1228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761-1205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761-1205 bp Feature: gene Location: 1253-1507 bp Feature: gene Location: 1809-2882 bp Feature: domain Description: Fib_succ_major Location: 2334-2877 bp Feature: domain Description: Fib_succ_major Location: 2334 -2877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-GII, Fib_succ_major (TIGR02145)

Seq: PLLX01000096.1 Bacteroidales bacterium isolate fen_983 73.20120800_E3S.44_contig_5047, whole genome shotgun sequence (24117 bp)
Overview 1 RT 1: 11267-18095 bp Neighborhood of RT #1 [11267, 18100] RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like RVT-UG2 INTN1_C_like DUF302 Feature: gene Location: 11267-13099 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 11276-11828 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 11276-11828 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 11858-12425 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 1185 8-12425 bp Feature: gene Location: 13255-13419 bp Feature: gene Location: 13689-15215 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 13938-14859 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 13938-1485 9 bp Feature: gene Location: 15868-17178 bp Feature: domain Description: INTN1_C_like Location: 16585-17131 bp Feature: domain Description: INTN1_C_like Location: 165 85 -17131 bp Feature: gene Location: 17714-18100 bp Feature: domain Description: DUF302 Location: 17729-18095 bp Feature: domain Description: DUF302 Location: 17729-18095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_SonII-TRD2-CR2_like (cd17246), RVT-UG2, INTN1_C_like (cd01185), DUF302 (pfam03625)