myRT

myRT report for GCA_003141575.1_20120800_E2X

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Seq: PLMP01000132.1 Bacteroidales bacterium isolate fen_978 73.20120800_E2X.54_contig_26741, whole genome shotgun sequence (31075 bp)
Overview 1 RT 1: 28116-31072 bp Neighborhood of RT #1 [28116, 31072] DUF4918 RVT-GII GIIM Feature: gene Location: 28116-28289 bp Feature: gene Location: 28392-28826 bp Feature: domain Description: DUF4918 Location: 28407-28812 bp Feature: domain Description: DUF491 8 Location: 28407-2881 2 bp Feature: gene Location: 29163-30413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29376-30042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29376-30042 bp Feature: domain Description: GIIM Note: maturase Location: 30123-30327 bp Feature: domain Description: GIIM Note: maturase Location: 301 23-30327 bp Feature: gene Location: 30770-31072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4918 (pfam16265), RVT-GII, GIIM (pfam08388)

Seq: PLMP01000295.1 Bacteroidales bacterium isolate fen_978 73.20120800_E2X.54_contig_3817, whole genome shotgun sequence (20211 bp)
Overview 1 RT 1: 11267-18095 bp Neighborhood of RT #1 [11267, 18100] RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like RVT-UG2 INTN1_C_like DUF302 Feature: gene Location: 11267-13099 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 11276-11828 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 112 76-1182 8 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 11858-12425 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 11858-12 42 5 bp Feature: gene Location: 13255-13419 bp Feature: gene Location: 13689-15215 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 13938-14859 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 13938-14859 bp Feature: gene Location: 15868-17178 bp Feature: domain Description: INTN1_C_like Location: 16585-17131 bp Feature: domain Description: INTN1_C_like Location: 16585-17131 bp Feature: gene Location: 17714-18100 bp Feature: domain Description: DUF302 Location: 17729-18095 bp Feature: domain Description: DUF302 Location: 1772 9-18095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_SonII-TRD2-CR2_like (cd17246), RVT-UG2, INTN1_C_like (cd01185), DUF302 (pfam03625)