myRT

myRT report for GCA_003141655.1_20120800_E2X

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Seq: PLMY01000094.1 Syntrophaceae bacterium isolate fen_1162 73.20120800_E2X.11_contig_3132, whole genome shotgun sequence (49639 bp)
Overview 1 RT 1: 199-4642 bp Neighborhood of RT #1 [199, 4647] DDE_3 HTH_33 RVT-GII GIIM COG4198 Feature: gene Location: 199-753 bp Feature: domain Description: DDE_3 Location: 253-664 bp Feature: domain Description: DDE_3 Location: 253-664 bp Feature: gene Location: 771-1247 bp Feature: domain Description: HTH_33 Location: 1104-1245 bp Feature: domain Description: HTH_33 Location: 1 1 04-1 245 bp Feature: gene Location: 1406-2713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1727-2345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 727-2345 bp Feature: domain Description: GIIM Note: maturase Location: 2396-2600 bp Feature: domain Description: GIIM Note: maturase Location: 2396-2600 bp Feature: gene Location: 2981-3187 bp Feature: gene Location: 3406-4647 bp Feature: domain Description: COG4198 Location: 3418-4642 bp Feature: domain Description: COG41 98 Location: 341 8-4642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358), COG4198 (Uncharacterized conserved protein, DUF1015 family ), HTH_33 (pfam13592)