myRT

myRT report for GCA_003142235.1_20120700_S3X

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Seq: PLOU01000043.1 Granulicella sp. isolate bog_404 73.20120700_S3X.39_contig_3205, whole genome shotgun sequence (15280 bp)
Overview 1 RT 1: 9841-13654 bp Neighborhood of RT #1 [9841, 13654] RVT-GII GIIM Feature: gene Location: 9841-10428 bp Feature: gene Location: 11054-11473 bp Feature: gene Location: 11697-13025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11985-12648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 985-1 2648 bp Feature: domain Description: GIIM Note: maturase Location: 12726-12921 bp Feature: domain Description: GIIM Note: maturase Location: 1 2726-1 2921 bp Feature: gene Location: 12928-13275 bp Feature: gene Location: 13313-13654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PLOU01000015.1 Granulicella sp. isolate bog_404 73.20120700_S3X.39_contig_4042, whole genome shotgun sequence (2818 bp)
Overview 1 RT 1: 259-2680 bp Neighborhood of RT #1 [259, 2799] RVT-GII DDE_3 Feature: gene Location: 259-489 bp Feature: gene Location: 503-2065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1688 bp Feature: gene Location: 2116-2799 bp Feature: domain Description: DDE_3 Location: 2227-2680 bp Feature: domain Description: DDE_3 Location: 2 2 2 7-2 680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_3 (pfam13358)

Seq: PLOU01000200.1 Granulicella sp. isolate bog_404 73.20120700_S3X.39_contig_9428, whole genome shotgun sequence (3522 bp)
Overview 1 RT 1: 86-1586 bp Neighborhood of RT #1 [86, 1603] RVT-GII GIIM IstB_IS21 DUF1778 Feature: gene Location: 86-748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95-326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95-3 26 bp Feature: domain Description: GIIM Note: maturase Location: 386-590 bp Feature: domain Description: GIIM Note: maturase Location: 3 86-590 bp Feature: gene Location: 884-1276 bp Feature: domain Description: IstB_IS21 Location: 920-1268 bp Feature: domain Description: IstB_IS21 Location: 920-1268 bp Feature: gene Location: 1322-1603 bp Feature: domain Description: DUF1778 Location: 1355-1586 bp Feature: domain Description: DUF1778 Location: 13 55-1586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), IstB_IS21 (pfam01695), DUF1778 (pfam08681)