myRT

myRT report for GCA_003142415.1_20120800_E3D

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Seq: PLMH01000144.1 Acidobacteria bacterium isolate fen_414 73.20120800_E3D.4_contig_10458, whole genome shotgun sequence (5013 bp)
Overview 1 RT 1: 1-2228 bp Neighborhood of RT #1 [1, 2344] RVT-GII INT_ICEBs1_C_like INT_ICEBs1_C_like Feature: gene Location: 1-285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-271 bp Feature: gene Location: 308-979 bp Feature: domain Description: INT_ICEBs1_C_like Location: 389-878 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 389-878 bp Feature: gene Location: 1085-2344 bp Feature: domain Description: INT_ICEBs1_C_like Location: 1745-2228 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 1 745-2228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), RVT-GII

Seq: PLMH01000110.1 Acidobacteria bacterium isolate fen_414 73.20120800_E3D.4_contig_12222, whole genome shotgun sequence (25933 bp)
Overview 1 RT 1: 9388-14224 bp Neighborhood of RT #1 [9388, 14310] VirB10 RVT-GII TrbL Feature: gene Location: 9388-10659 bp Feature: domain Description: VirB10 Location: 10093-10621 bp Feature: domain Description: VirB10 Location: 10093-1062 1 bp Feature: gene Location: 10687-11508 bp Feature: gene Location: 11615-13099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12035-12725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 035-12 72 5 bp Feature: gene Location: 13096-13428 bp Feature: gene Location: 13474-14310 bp Feature: domain Description: TrbL Location: 13582-14224 bp Feature: domain Description: TrbL Location: 13582 -142 2 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TrbL (pfam04610), VirB10 (COG2948)

Seq: PLMH01000133.1 Acidobacteria bacterium isolate fen_414 73.20120800_E3D.4_contig_20818, whole genome shotgun sequence (16114 bp)
Overview 1 RT 1: 11687-15796 bp Neighborhood of RT #1 [11687, 15933] Peptidase_C14 RVT-GII InsE Tra5 Feature: gene Location: 11687-12436 bp Feature: domain Description: Peptidase_C14 Location: 11912-12344 bp Feature: domain Description: Peptidase_C14 Location: 11912-123 44 bp Feature: gene Location: 12491-12934 bp Feature: gene Location: 12961-14271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13216-13903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 216-13 903 bp Feature: gene Location: 14399-14941 bp Feature: domain Description: InsE Location: 14588-14894 bp Feature: domain Description: InsE Location: 14588-14894 bp Feature: gene Location: 14941-15933 bp Feature: domain Description: Tra5 Location: 15082-15796 bp Feature: domain Description: Tra5 Location: 15082-15796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_C14 (pfam00656), RVT-GII, InsE (COG2963), Tra5 (COG2801)