myRT

myRT report for GCA_003142675.1_20120800_E2D

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Seq: PLNB01000065.1 Acidobacteria bacterium isolate fen_412 73.20120800_E2D.7_contig_10819, whole genome shotgun sequence (31825 bp)
Overview 1 RT 1: 17578-22462 bp Neighborhood of RT #1 [17578, 22500] TrbL RVT-GII VirB10 Feature: gene Location: 17578-18414 bp Feature: domain Description: TrbL Location: 17686-18328 bp Feature: domain Description: TrbL Location: 1 7686-1 8328 bp Feature: gene Location: 18460-18792 bp Feature: gene Location: 18789-20273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19209-19899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9209-1 9899 bp Feature: gene Location: 20380-21201 bp Feature: gene Location: 21229-22500 bp Feature: domain Description: VirB10 Location: 21934-22462 bp Feature: domain Description: VirB1 0 Location: 21 934-22462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrbL (pfam04610), RVT-GII, VirB10 (COG2948)

Seq: PLNB01000245.1 Acidobacteria bacterium isolate fen_412 73.20120800_E2D.7_contig_30586, whole genome shotgun sequence (13903 bp)
Overview 1 RT 1: 1-2124 bp Neighborhood of RT #1 [1, 2216] RVT-GII Peptidase_C14 Feature: gene Location: 1-942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256-943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 56-943 bp Feature: gene Location: 969-1412 bp Feature: gene Location: 1467-2216 bp Feature: domain Description: Peptidase_C14 Location: 1692-2124 bp Feature: domain Description: Peptidase_C14 Location: 1692 -2 12 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_C14 (pfam00656), RVT-GII

Seq: PLNB01000303.1 Acidobacteria bacterium isolate fen_412 73.20120800_E2D.7_contig_71474, whole genome shotgun sequence (5015 bp)
Overview 1 RT 1: 2671-5000 bp Neighborhood of RT #1 [2671, 5014] INT_ICEBs1_C_like INT_ICEBs1_C_like RVT-GII Feature: gene Location: 2671-3930 bp Feature: domain Description: INT_ICEBs1_C_like Location: 3331-3814 bp Feature: domain Description: INT_ICEBs1_C_like Location: 3 3 3 1-3 814 bp Feature: gene Location: 4036-4707 bp Feature: domain Description: INT_ICEBs1_C_like Location: 4117-4606 bp Feature: domain Description: INT_ICEBs1_C_like Location: 4117-4606 bp Feature: gene Location: 4730-5014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4733-5000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 473 3 -5000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), RVT-GII