myRT

myRT report for GCA_003142855.1_20120800_E1D

Download annotations/find similar RTs

Seq: PLNW01000119.1 Myxococcales bacterium isolate fen_1158 73.20120800_E1D.7_contig_14254, whole genome shotgun sequence (16653 bp)
Overview 1 RT 1: 4296-8389 bp Neighborhood of RT #1 [4296, 8389] pfam03781 Avd_like RVT-DGRs Feature: gene Location: 4296-5882 bp Feature: domain Description: pfam03781 Location: 5157-5871 bp Feature: domain Description: pfam03781 Location: 51 57-5871 bp Feature: gene Location: 6167-6376 bp Feature: domain Description: Avd_like Location: 6179-6362 bp Feature: domain Description: Avd_like Location: 61 79-6362 bp Feature: gene Location: 6735-8156 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7281-7920 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7281 -7920 bp Feature: gene Location: 7844-8026 bp Feature: gene Location: 8090-8389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), Avd_like (cd16376), RVT-DGRs

Seq: PLNW01000028.1 Myxococcales bacterium isolate fen_1158 73.20120800_E1D.7_contig_18865, whole genome shotgun sequence (8738 bp)
Overview 1 RT 1: 1312-7893 bp Neighborhood of RT #1 [1312, 7893] TraG-D_C Avd_like RVT-DGRs XerC TPR_2 TPR_2 PEGA PEGA Feature: gene Location: 1312-2454 bp Feature: domain Description: TraG-D_C Location: 1525-1936 bp Feature: domain Description: TraG-D_C Location: 152 5-1936 bp Feature: gene Location: 1987-2622 bp Feature: domain Description: Avd_like Location: 2311-2608 bp Feature: domain Description: Avd_like Location: 2 311-2 608 bp Feature: gene Location: 2981-4042 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3167-3806 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3167-3806 bp Feature: gene Location: 3951-6281 bp Feature: domain Description: XerC Location: 4458-5178 bp Feature: domain Description: XerC Location: 4458-5178 bp Feature: domain Description: TPR_2 Location: 5466-5544 bp Feature: domain Description: TPR_2 Location: 5466-5544 bp Feature: domain Description: TPR_2 Location: 5559-5625 bp Feature: domain Description: TPR_2 Location: 5559-562 5 bp Feature: domain Description: PEGA Location: 5724-5922 bp Feature: domain Description: PEGA Location: 572 4-592 2 bp Feature: domain Description: PEGA Location: 5970-6171 bp Feature: domain Description: PEGA Location: 5970-6171 bp Feature: gene Location: 7633-7893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Avd_like (cd16376), RVT-DGRs, XerC (COG4973), TPR_2 (pfam07719), PEGA (pfam08308)