myRT

myRT report for GCA_003142915.1_20120800_E1D

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Seq: PLNZ01000123.1 Ignavibacteriales bacterium isolate fen_1297 73.20120800_E1D.52_contig_15809, whole genome shotgun sequence (4432 bp)
Overview 1 RT 1: 1573-4103 bp Neighborhood of RT #1 [1573, 4378] PTC1 RVT-DGRs Feature: gene Location: 1573-1932 bp Feature: gene Location: 1975-3012 bp Feature: domain Description: PTC1 Location: 2005-2719 bp Feature: domain Description: PTC1 Location: 2005-271 9 bp Feature: gene Location: 3209-4378 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3401-4103 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3401 -41 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTC1 (COG0631), RVT-DGRs

Seq: PLNZ01000240.1 Ignavibacteriales bacterium isolate fen_1297 73.20120800_E1D.52_contig_17920, whole genome shotgun sequence (3787 bp)
Overview 1 RT 1: 3-3398 bp Neighborhood of RT #1 [3, 3398] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Feature: gene Location: 3-140 bp Feature: gene Location: 359-634 bp Feature: domain Description: Cas2_I_II_III Location: 368-590 bp Feature: domain Description: Cas2 _I_II_III Location: 368-590 bp Feature: gene Location: 761-2803 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 944-1538 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 944-1538 bp Feature: domain Description: Cas1_I-II-III Location: 1877-2753 bp Feature: domain Description: Cas1_I-II-III Location: 1877-2 753 bp Feature: gene Location: 3003-3398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: PLNZ01000395.1 Ignavibacteriales bacterium isolate fen_1297 73.20120800_E1D.52_contig_187357, whole genome shotgun sequence (3469 bp)
Overview 1 RT 1: 1-3463 bp Neighborhood of RT #1 [1, 3468] PRK15064 RVT-GII GIIM Feature: gene Location: 1-1317 bp Feature: domain Description: PRK15064 Location: 4-1318 bp Feature: domain Description: PRK15064 Location: 4-13 18 bp Feature: gene Location: 1921-2079 bp Feature: gene Location: 2272-3468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2563-3205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2563 -3 205 bp Feature: domain Description: GIIM Note: maturase Location: 3277-3463 bp Feature: domain Description: GIIM Note: maturase Location: 3 277-3 463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15064 (ABC transporter ATP-binding protein; Provisional), RVT-GII, GIIM (pfam08388)