myRT

myRT report for GCA_003143615.1_ASM314361v1

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Seq: QEMS01000011.1 Escherichia coli strain B7S19 NODE_11_length_146649_cov_130.567, whole genome shotgun sequence (146649 bp)
Overview 1 RT 1: 5300-11194 bp Neighborhood of RT #1 [5300, 11331] nitrilase RVT-UG5 AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 5300-5770 bp Feature: gene Location: 6117-8183 bp Feature: domain Description: nitrilase Location: 7497-8094 bp Feature: domain Description: nitrilase Location: 7497-8094 bp Feature: gene Location: 8229-9326 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8757-9246 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8757-9246 bp Feature: gene Location: 9621-10424 bp Feature: domain Description: AbiEi_3_N Location: 9654-9915 bp Feature: domain Description: AbiEi_3_N Location: 9654-991 5 bp Feature: domain Description: AbiEi_3 Location: 9927-10383 bp Feature: domain Description: AbiEi_3 Location: 9927-1 0383 bp Feature: gene Location: 10411-11331 bp Feature: domain Description: AbiEii Location: 10453-11194 bp Feature: domain Description: AbiEii Location: 1 0453-1 1 1 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nitrilase (cl11424), RVT-UG5, AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: QEMS01000127.1 Escherichia coli strain B7S19 NODE_127_length_2707_cov_122.457, whole genome shotgun sequence (2707 bp)
Overview 1 RT 1: 2-2707 bp Neighborhood of RT #1 [2, 2706] Tra5 RVT-GII GIIM PHA02517 Feature: gene Location: 2-265 bp Feature: domain Description: Tra5 Location: 32-200 bp Feature: domain Description: Tra5 Location: 32 -2 00 bp Feature: gene Location: 857-2098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1130-1862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1130-1862 bp Feature: domain Description: GIIM Note: maturase Location: 1937-2093 bp Feature: domain Description: GIIM Note: maturase Location: 1937-2 093 bp Feature: gene Location: 2150-2380 bp Feature: gene Location: 2491-2706 bp Feature: domain Description: PHA02517 Location: 2494-2707 bp Feature: domain Description: PHA02 517 Location: 2 494-2 707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: QEMS01000057.1 Escherichia coli strain B7S19 NODE_57_length_27853_cov_137.718, whole genome shotgun sequence (27853 bp)
Overview 1 RT 1: 3777-8623 bp Neighborhood of RT #1 [3777, 8623] DUF3987 Inovirus_Gp2 RVT-GII Feature: gene Location: 3777-5210 bp Feature: domain Description: DUF3987 Location: 3870-4947 bp Feature: domain Description: DUF3 987 Location: 3 870-4947 bp Feature: gene Location: 6069-6632 bp Feature: domain Description: Inovirus_Gp2 Location: 6126-6567 bp Feature: domain Description: Inovirus_Gp2 Location: 6126-6567 bp Feature: gene Location: 6958-8121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7072-7759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7072-7759 bp Feature: gene Location: 8108-8416 bp Feature: gene Location: 8450-8623 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3987 (pfam13148), Inovirus_Gp2 (pfam11726), RVT-GII