myRT

myRT report for GCA_003143835.1_ASM314383v1

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Seq: QFTK01000057.1 Stenotrophomonas maltophilia strain D5_25A NODE_57_length_30904_cov_22.834_ID_113, whole genome shotgun sequence (30904 bp)
Overview 1 RT 1: 21345-27102 bp Neighborhood of RT #1 [21345, 27104] DUF805 RVT_N RVT-GII GIIM HNHc Triacylglycerol_lipase_like YhjY PRK05659 Feature: gene Location: 21345-21749 bp Feature: domain Description: DUF805 Location: 21378-21732 bp Feature: domain Description: DUF805 Location: 21 378-21 732 bp Feature: gene Location: 21746-22087 bp Feature: gene Location: 22176-23828 bp Feature: RT Description: RVT_N Location: 22227-22470 bp Feature: RT Description: RVT_N Location: 22227-22470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22515-23136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2251 5-231 36 bp Feature: domain Description: GIIM Note: maturase Location: 23190-23421 bp Feature: domain Description: GIIM Note: maturase Location: 231 90-23421 bp Feature: domain Description: HNHc Note: nucleases Location: 23622-23775 bp Feature: domain Description: HNHc Note: nucleases Location: 23622-23775 bp Feature: gene Location: 24862-26697 bp Feature: domain Description: Triacylglycerol_lipase_like Location: 24952-25777 bp Feature: domain Description: Triacylglycerol_lipase_like Location: 24952-25777 bp Feature: domain Description: YhjY Location: 25969-26683 bp Feature: domain Description: YhjY Location: 25969-26683 bp Feature: gene Location: 26904-27104 bp Feature: domain Description: PRK05659 Location: 26907-27102 bp Feature: domain Description: PRK05659 Location: 26907-271 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF805 (pfam05656), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Triacylglycerol_lipase_like (cd01847), YhjY (COG5571), PRK05659 (sulfur carrier protein ThiS; Validated)

Seq: QFTK01000006.1 Stenotrophomonas maltophilia strain D5_25A NODE_6_length_95178_cov_22.4806_ID_11, whole genome shotgun sequence (95178 bp)
Overview 1 RT 1: 33099-37688 bp Neighborhood of RT #1 [33099, 37825] AAA_21 AAA_21 RVT-Retrons Histone_HNS INT_C_like_1 Feature: gene Location: 33099-33290 bp Feature: gene Location: 33371-34711 bp Feature: domain Description: AAA_21 Location: 33455-33596 bp Feature: domain Description: AAA_2 1 Location: 33455-33596 bp Feature: domain Description: AAA_21 Location: 33947-34118 bp Feature: domain Description: AAA_2 1 Location: 33947-34118 bp Feature: gene Location: 34708-35664 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34822-35371 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3482 2 -35371 bp Feature: gene Location: 35968-36339 bp Feature: domain Description: Histone_HNS Location: 36004-36313 bp Feature: domain Description: Histone_HNS Location: 36004-36313 bp Feature: gene Location: 36425-37825 bp Feature: domain Description: INT_C_like_1 Location: 37088-37688 bp Feature: domain Description: INT_C_like_1 Location: 37088-37688 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-Retrons, Histone_HNS (pfam00816), INT_C_like_1 (cd01184)