myRT

myRT report for GCA_003143855.1_ASM314385v1

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Seq: QFRK01000010.1 Streptomyces sp. NWU339 Contig_175, whole genome shotgun sequence (265817 bp)
Overview 1 RT 1: 78459-83429 bp Neighborhood of RT #1 [78459, 83452] InsE RVT-GII GIIM PHA02517 Glyco_hydro_114 Feature: gene Location: 78459-78602 bp Feature: gene Location: 79100-79405 bp Feature: domain Description: InsE Location: 79103-79397 bp Feature: domain Description: InsE Location: 791 03-79397 bp Feature: gene Location: 79980-81449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80322-81018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80322-81 01 8 bp Feature: domain Description: GIIM Note: maturase Location: 81090-81309 bp Feature: domain Description: GIIM Note: maturase Location: 81 090-81 309 bp Feature: gene Location: 81182-82486 bp Feature: domain Description: PHA02517 Location: 81641-82463 bp Feature: domain Description: PHA0251 7 Location: 81 641 -82463 bp Feature: gene Location: 82538-83452 bp Feature: domain Description: Glyco_hydro_114 Location: 82787-83429 bp Feature: domain Description: Glyco_hydro_1 1 4 Location: 82787-83429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Glyco_hydro_114 (pfam03537)

Seq: QFRK01000073.1 Streptomyces sp. NWU339 Contig_39, whole genome shotgun sequence (31896 bp)
Overview 1 RT 1: 1837-5850 bp 2 RT 2: 19543-24773 bp Neighborhood of RT #1 [1837, 5850] YozG DDE_Tnp_1_assoc RVT-GII Intron_maturas2 Neighborhood of RT #2 [19543, 24773] Rve Rve RVT-GII GIIM MFS_MefA_like Feature: gene Location: 1837-2073 bp Feature: domain Description: YozG Location: 1861-2059 bp Feature: domain Description: YozG Location: 1861-2 059 bp Feature: gene Location: 2269-3111 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 2350-2620 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 2 350-2 62 0 bp Feature: gene Location: 3322-5091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3583-4378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3583-4378 bp Feature: domain Description: Intron_maturas2 Location: 4480-4708 bp Feature: domain Description: Intron_maturas2 Location: 4480-4708 bp Feature: gene Location: 5116-5700 bp Feature: gene Location: 5722-5850 bp Feature: gene Location: 19543-20016 bp Feature: domain Description: Rve Location: 19555-19819 bp Feature: domain Description: Rve Location: 19555-19819 bp Feature: gene Location: 20225-20389 bp Feature: domain Description: Rve Location: 20252-20387 bp Feature: domain Description: Rve Location: 2 02 52 -2 0387 bp Feature: gene Location: 20572-21591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20575-21205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0575-2 12 05 bp Feature: domain Description: GIIM Note: maturase Location: 21286-21490 bp Feature: domain Description: GIIM Note: maturase Location: 2 12 86-2 1490 bp Feature: gene Location: 22458-24056 bp Feature: domain Description: MFS_MefA_like Location: 22845-23985 bp Feature: domain Description: MFS_MefA_like Location: 2 2 845-2 3985 bp Feature: gene Location: 24630-24773 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YozG (COG3655), DDE_Tnp_1_assoc (pfam13808), RVT-GII, Intron_maturas2 (pfam01348), Rve (COG3316), GIIM (pfam08388), MFS_MefA_like (cd06173)

Seq: QFRK01000060.1 Streptomyces sp. NWU339 Contig_41, whole genome shotgun sequence (44817 bp)
Overview 1 RT 1: 2-2451 bp Neighborhood of RT #1 [2, 2451] RVT-GII DDE_Tnp_1_assoc DDE_Tnp_1 Feature: gene Location: 2-772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 254-647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 254-647 bp Feature: gene Location: 812-1981 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 890-1163 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 890-1163 bp Feature: domain Description: DDE_Tnp_1 Location: 1217-1880 bp Feature: domain Description: DDE_Tnp_1 Location: 1217-1880 bp Feature: gene Location: 2080-2451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_1_assoc (pfam13808), DDE_Tnp_1 (pfam01609)

Seq: QFRK01000149.1 Streptomyces sp. NWU339 Contig_91, whole genome shotgun sequence (5034 bp)
Overview 1 RT 1: 1-1929 bp Neighborhood of RT #1 [1, 1934] RVT-GII GIIM PHA02517 Aldo_ket_red Feature: gene Location: 1-552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-121 bp Feature: domain Description: GIIM Note: maturase Location: 193-412 bp Feature: domain Description: GIIM Note: maturase Location: 193-4 12 bp Feature: gene Location: 285-1559 bp Feature: domain Description: PHA02517 Location: 741-1296 bp Feature: domain Description: PHA02517 Location: 74 1-1296 bp Feature: gene Location: 1752-1934 bp Feature: domain Description: Aldo_ket_red Location: 1770-1929 bp Feature: domain Description: Aldo_ket_red Location: 1770-1929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Aldo_ket_red (pfam00248)