myRT

myRT report for GCA_003143935.1_ASM314393v1

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Seq: QFRX01000001.1 Streptomyces sp. Act143 Scaffold_1, whole genome shotgun sequence (9448029 bp)
Overview 1 RT 1: 5345392-5351297 bp Neighborhood of RT #1 [5345392, 5351395] YiaG TPR YdcF-like RVT_N RVT-GII GIIM HNH WbqC HTH_XRE Cupin_2 Feature: gene Location: 5345392-5346435 bp Feature: domain Description: YiaG Location: 5345401-5345518 bp Feature: domain Description: YiaG Location: 5345401 -534551 8 bp Feature: domain Description: TPR Location: 5345923-5346118 bp Feature: domain Description: TPR Location: 5345923-53461 1 8 bp Feature: gene Location: 5346450-5347121 bp Feature: domain Description: YdcF-like Location: 5346564-5346921 bp Feature: domain Description: YdcF-like Location: 5346564-5346921 bp Feature: gene Location: 5347833-5349602 bp Feature: RT Description: RVT_N Location: 5347905-5348148 bp Feature: RT Description: RVT_N Location: 5347905-53481 48 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5348202-5348859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5348202-5348859 bp Feature: domain Description: GIIM Note: maturase Location: 5348913-5349144 bp Feature: domain Description: GIIM Note: maturase Location: 534891 3-53491 44 bp Feature: domain Description: HNH Note: nucleases Location: 5349468-5349570 bp Feature: domain Description: HNH Note: nucleases Location: 5349468-5349570 bp Feature: gene Location: 5349882-5350409 bp Feature: domain Description: WbqC Location: 5349888-5350248 bp Feature: domain Description: WbqC Location: 5349888-5350248 bp Feature: gene Location: 5350514-5351395 bp Feature: domain Description: HTH_XRE Location: 5350814-5350982 bp Feature: domain Description: HTH_XRE Location: 535081 4-5350982 bp Feature: domain Description: Cupin_2 Location: 5351126-5351297 bp Feature: domain Description: Cupin_2 Location: 5351 1 26-5351 297 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YiaG (COG2944), TPR (smart00028), YdcF-like (cl00630), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), WbqC (pfam08889), HTH_XRE (smart00530), Cupin_2 (pfam07883)