myRT

myRT report for GCA_003144555.1_ASM314455v1

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Seq: QEXA01000001.1 Proteus vulgaris strain 08MAS1600 Scaffold1_1, whole genome shotgun sequence (1123831 bp)
Overview 1 RT 1: 247287-250404 bp 2 RT 2: 267841-271701 bp 3 RT 3: 621378-624854 bp Neighborhood of RT #1 [247287, 250404] RVT-Retrons Neighborhood of RT #2 [267841, 271727] COG3499 D RVT-UG12 PRK09678 PRK10040 Neighborhood of RT #3 [621378, 624854] prok_nadp_idh RVT-UG12 Feature: gene Location: 247287-247421 bp Feature: gene Location: 247444-247680 bp Feature: gene Location: 247989-248948 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 248124-248691 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2481 24-248691 bp Feature: gene Location: 248957-250081 bp Feature: gene Location: 250177-250404 bp Feature: gene Location: 267841-268302 bp Feature: domain Description: COG3499 Location: 267844-268258 bp Feature: domain Description: COG3499 Location: 267844-268258 bp Feature: gene Location: 268302-269399 bp Feature: domain Description: D Location: 268323-269379 bp Feature: domain Description: D Location: 268323-269379 bp Feature: gene Location: 269429-271147 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 269786-270239 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 269786-270239 bp Feature: gene Location: 271259-271477 bp Feature: domain Description: PRK09678 Location: 271262-271469 bp Feature: domain Description: PRK09678 Location: 271 262-271 469 bp Feature: gene Location: 271524-271727 bp Feature: domain Description: PRK10040 Location: 271554-271701 bp Feature: domain Description: PRK1 0040 Location: 271 554-271 701 bp Feature: gene Location: 621378-621941 bp Feature: gene Location: 622261-622482 bp Feature: domain Description: prok_nadp_idh Location: 622399-622471 bp Feature: domain Description: prok_nadp_idh Location: 622399-622471 bp Feature: gene Location: 622505-624148 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 622886-623321 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 622886-623321 bp Feature: gene Location: 624188-624550 bp Feature: gene Location: 624588-624854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3499 (Phage protein U ), D (PHA02561), RVT-UG12, PRK09678 (DNA-binding transcriptional regulator; Provisional), PRK10040 (hypothetical protein; Provisional), prok_nadp_idh (TIGR00183)