myRT

myRT report for GCA_003145195.1_ASM314519v1

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Seq: NBCK01000051.1 Escherichia coli strain Win2012_WWKa_NEU_31 Cont051, whole genome shotgun sequence (2751 bp)
Overview 1 RT 1: 101-2414 bp Neighborhood of RT #1 [101, 2659] PHA02517 RVT-GII GIIM Feature: gene Location: 101-544 bp Feature: domain Description: PHA02517 Location: 137-479 bp Feature: domain Description: PHA0251 7 Location: 1 37-479 bp Feature: gene Location: 1136-2659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1409-2141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 409-21 41 bp Feature: domain Description: GIIM Note: maturase Location: 2216-2414 bp Feature: domain Description: GIIM Note: maturase Location: 221 6-241 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NBCK01000151.1 Escherichia coli strain Win2012_WWKa_NEU_31 Cont151, whole genome shotgun sequence (2521 bp)
Overview 1 RT 1: 3-2184 bp Neighborhood of RT #1 [3, 2429] PHA02517 RVT-GII GIIM Feature: gene Location: 3-314 bp Feature: domain Description: PHA02517 Location: 15-249 bp Feature: domain Description: PHA02 517 Location: 15-2 49 bp Feature: gene Location: 906-2429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1179-1911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1179-1911 bp Feature: domain Description: GIIM Note: maturase Location: 1986-2184 bp Feature: domain Description: GIIM Note: maturase Location: 1986-2 184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NBCK01000152.1 Escherichia coli strain Win2012_WWKa_NEU_31 Cont152, whole genome shotgun sequence (3640 bp)
Overview 1 RT 1: 93-3008 bp Neighborhood of RT #1 [93, 3010] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 66-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173 -13 71 bp Feature: gene Location: 2208-2687 bp Feature: domain Description: PHA02517 Location: 2268-2622 bp Feature: domain Description: PHA02517 Location: 2268-2622 bp Feature: gene Location: 2687-3010 bp Feature: domain Description: InsE Location: 2699-3008 bp Feature: domain Description: InsE Location: 2699-3 008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, GIIM (pfam08388)

Seq: NBCK01000153.1 Escherichia coli strain Win2012_WWKa_NEU_31 Cont153, whole genome shotgun sequence (2508 bp)
Overview 1 RT 1: 93-2442 bp Neighborhood of RT #1 [93, 2507] RVT-GII GIIM PHA02517 Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 2208-2507 bp Feature: domain Description: PHA02517 Location: 2220-2442 bp Feature: domain Description: PHA02517 Location: 2220-24 4 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NBCK01000154.1 Escherichia coli strain Win2012_WWKa_NEU_31 Cont154, whole genome shotgun sequence (3007 bp)
Overview 1 RT 1: 93-2540 bp Neighborhood of RT #1 [93, 2540] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1910-2347 bp Feature: gene Location: 2358-2540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NBCK01000155.1 Escherichia coli strain Win2012_WWKa_NEU_31 Cont155, whole genome shotgun sequence (9091 bp)
Overview 1 RT 1: 1-3614 bp Neighborhood of RT #1 [1, 3619] RVT-GII GIIM fruct_sucro_rep Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-16 6 2 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: gene Location: 2338-2559 bp Feature: gene Location: 2615-3619 bp Feature: domain Description: fruct_sucro_rep Location: 2636-3614 bp Feature: domain Description: fruct_sucro_rep Location: 26 36 -36 14 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fruct_sucro_rep (TIGR02417), RVT-GII, GIIM (pfam08388)

Seq: NBCK01000156.1 Escherichia coli strain Win2012_WWKa_NEU_31 Cont156, whole genome shotgun sequence (43158 bp)
Overview 1 RT 1: 822-3427 bp Neighborhood of RT #1 [822, 3525] RVT-GII GIIM PHA02517 AcrR Feature: gene Location: 822-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 17 37 -1935 bp Feature: gene Location: 2297-2737 bp Feature: domain Description: PHA02517 Location: 2300-2726 bp Feature: domain Description: PHA02517 Location: 2300-27 26 bp Feature: gene Location: 2953-3525 bp Feature: domain Description: AcrR Location: 2971-3427 bp Feature: domain Description: AcrR Location: 297 1-3427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), AcrR (COG1309), RVT-GII, GIIM (pfam08388)

Seq: NBCK01000254.1 Escherichia coli strain Win2012_WWKa_NEU_31 Cont254, whole genome shotgun sequence (3406 bp)
Overview 1 RT 1: 3-3403 bp Neighborhood of RT #1 [3, 3403] COG4644 PHA02517 RVT-GII GIIM Feature: gene Location: 3-533 bp Feature: domain Description: COG4644 Location: 6-534 bp Feature: domain Description: COG4644 Location: 6-534 bp Feature: gene Location: 664-1110 bp Feature: domain Description: PHA02517 Location: 667-1108 bp Feature: domain Description: PHA02517 Location: 667-1108 bp Feature: gene Location: 1227-2750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1500-2232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1500-2232 bp Feature: domain Description: GIIM Note: maturase Location: 2307-2505 bp Feature: domain Description: GIIM Note: maturase Location: 2307-2505 bp Feature: gene Location: 3044-3403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG4644 (Transposase and inactivated derivatives, TnpA family ), PHA02517 (putative transposase OrfB; Reviewed)