myRT

myRT report for GCA_003145395.1_ASM314539v1

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Seq: NBDD01000056.1 Escherichia coli strain Sum2013_WWKa_OUT_2 Cont056, whole genome shotgun sequence (2505 bp)
Overview 1 RT 1: 3-2169 bp Neighborhood of RT #1 [3, 2414] PHA02517 RVT-GII GIIM Feature: gene Location: 3-299 bp Feature: domain Description: PHA02517 Location: 12-234 bp Feature: domain Description: PHA0251 7 Location: 1 2-234 bp Feature: gene Location: 891-2414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1164-1896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 64-1 896 bp Feature: domain Description: GIIM Note: maturase Location: 1971-2169 bp Feature: domain Description: GIIM Note: maturase Location: 1 971 -21 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NBDD01000076.1 Escherichia coli strain Sum2013_WWKa_OUT_2 Cont076, whole genome shotgun sequence (23407 bp)
Overview 1 RT 1: 20755-23404 bp Neighborhood of RT #1 [20755, 23404] RVT-GII GIIM Feature: gene Location: 20755-20886 bp Feature: gene Location: 20984-21160 bp Feature: gene Location: 21228-22751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21501-22233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1501-2 2 2 33 bp Feature: domain Description: GIIM Note: maturase Location: 22308-22506 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 308-2 2 506 bp Feature: gene Location: 23045-23404 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NBDD01000078.1 Escherichia coli strain Sum2013_WWKa_OUT_2 Cont078, whole genome shotgun sequence (17869 bp)
Overview 1 RT 1: 92-2621 bp Neighborhood of RT #1 [92, 2686] RVT-GII GIIM PHA02517 Feature: gene Location: 92-1615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 65-1097 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1370 bp Feature: domain Description: GIIM Note: maturase Location: 1172-13 70 bp Feature: gene Location: 1569-1994 bp Feature: gene Location: 2207-2686 bp Feature: domain Description: PHA02517 Location: 2267-2621 bp Feature: domain Description: PHA02517 Location: 2267-2621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NBDD01000079.1 Escherichia coli strain Sum2013_WWKa_OUT_2 Cont079, whole genome shotgun sequence (2741 bp)
Overview 1 RT 1: 92-2635 bp Neighborhood of RT #1 [92, 2635] RVT-GII GIIM Feature: gene Location: 92-1615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1097 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1370 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1370 bp Feature: gene Location: 1909-2280 bp Feature: gene Location: 2351-2635 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NBDD01000140.1 Escherichia coli strain Sum2013_WWKa_OUT_2 Cont140, whole genome shotgun sequence (43155 bp)
Overview 1 RT 1: 39631-42239 bp Neighborhood of RT #1 [39631, 42484] AcrR PHA02517 RVT-GII GIIM Feature: gene Location: 39631-40203 bp Feature: domain Description: AcrR Location: 39649-40105 bp Feature: domain Description: AcrR Location: 39649-40105 bp Feature: gene Location: 40419-40865 bp Feature: domain Description: PHA02517 Location: 40422-40854 bp Feature: domain Description: PHA025 17 Location: 40422-4085 4 bp Feature: gene Location: 40976-42484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41234-41966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41234-41966 bp Feature: domain Description: GIIM Note: maturase Location: 42041-42239 bp Feature: domain Description: GIIM Note: maturase Location: 42041-42239 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NBDD01000183.1 Escherichia coli strain Sum2013_WWKa_OUT_2 Cont183, whole genome shotgun sequence (2936 bp)
Overview 1 RT 1: 1-2600 bp Neighborhood of RT #1 [1, 2845] HTH_38 PHA02517 RVT-GII GIIM Feature: gene Location: 1-168 bp Feature: domain Description: HTH_38 Location: 10-124 bp Feature: domain Description: HTH_38 Location: 10-124 bp Feature: gene Location: 287-730 bp Feature: domain Description: PHA02517 Location: 323-665 bp Feature: domain Description: PHA02517 Location: 323-6 6 5 bp Feature: gene Location: 1322-2845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1595-2327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1595-2327 bp Feature: domain Description: GIIM Note: maturase Location: 2402-2600 bp Feature: domain Description: GIIM Note: maturase Location: 2402-26 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)