myRT

myRT report for GCA_003145625.1_ASM314562v1

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Seq: NBDJ01000050.1 Escherichia coli strain Sum2013_WWKa_NEU_29 Cont050, whole genome shotgun sequence (53149 bp)
Overview 1 RT 1: 48925-53146 bp Neighborhood of RT #1 [48925, 53146] DUF262 PHA02517 RVT-GII GIIM Feature: gene Location: 48925-50379 bp Feature: domain Description: DUF262 Location: 48988-49549 bp Feature: domain Description: DUF262 Location: 48988-49549 bp Feature: gene Location: 50401-50805 bp Feature: domain Description: PHA02517 Location: 50404-50794 bp Feature: domain Description: PHA0251 7 Location: 50404-50794 bp Feature: gene Location: 50970-52493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51243-51975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 243-51 975 bp Feature: domain Description: GIIM Note: maturase Location: 52050-52248 bp Feature: domain Description: GIIM Note: maturase Location: 52050-52248 bp Feature: gene Location: 52787-53146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF262 (pfam03235), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NBDJ01000156.1 Escherichia coli strain Sum2013_WWKa_NEU_29 Cont156, whole genome shotgun sequence (3075 bp)
Overview 1 RT 1: 93-2568 bp Neighborhood of RT #1 [93, 2633] RVT-GII GIIM PHA02517 Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1570-1995 bp Feature: gene Location: 2208-2633 bp Feature: domain Description: PHA02517 Location: 2232-2568 bp Feature: domain Description: PHA02 517 Location: 2 2 32 -2 568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)