myRT

myRT report for GCA_003145725.1_ASM314572v1

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Seq: NBJN01000030.1 Escherichia coli strain Spr2013_WWKa_OUT_55 Cont030, whole genome shotgun sequence (2168 bp)
Overview 1 RT 1: 3-2083 bp Neighborhood of RT #1 [3, 2083] RVT-GII GIIM Feature: gene Location: 3-146 bp Feature: gene Location: 329-1579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 533-1190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 533-1 1 90 bp Feature: domain Description: GIIM Note: maturase Location: 1271-1493 bp Feature: domain Description: GIIM Note: maturase Location: 1 271 -1 493 bp Feature: gene Location: 1573-1890 bp Feature: gene Location: 1943-2083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NBJN01000064.1 Escherichia coli strain Spr2013_WWKa_OUT_55 Cont064, whole genome shotgun sequence (28427 bp)
Overview 1 RT 1: 6442-12473 bp Neighborhood of RT #1 [6442, 12473] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 6442-7362 bp Feature: domain Description: AbiEii Location: 6484-7225 bp Feature: domain Description: AbiEii Location: 6484-72 2 5 bp Feature: gene Location: 7349-8152 bp Feature: domain Description: AbiEi_3_N Location: 7382-7643 bp Feature: domain Description: AbiEi_3_N Location: 7382 -7643 bp Feature: domain Description: AbiEi_3 Location: 7655-8111 bp Feature: domain Description: AbiEi_3 Location: 7655-8111 bp Feature: gene Location: 8447-11656 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8975-9464 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8975-9464 bp Feature: domain Description: nitrilase Location: 10970-11567 bp Feature: domain Description: nitrilase Location: 10970-11567 bp Feature: gene Location: 11817-11957 bp Feature: domain Description: Phage_ASH Location: 11844-11937 bp Feature: domain Description: Phage_ASH Location: 11844-11937 bp Feature: gene Location: 12003-12473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)