myRT

myRT report for GCA_003146255.1_ASM314625v1

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Seq: NBKP01000024.1 Escherichia coli strain Spr2012_WWKa_ALT_35 Cont024, whole genome shotgun sequence (2507 bp)
Overview 1 RT 1: 1-2170 bp Neighborhood of RT #1 [1, 2415] PHA02517 RVT-GII GIIM Feature: gene Location: 1-300 bp Feature: domain Description: PHA02517 Location: 13-235 bp Feature: domain Description: PHA0251 7 Location: 1 3-235 bp Feature: gene Location: 892-2415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1165-1897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 65-1 897 bp Feature: domain Description: GIIM Note: maturase Location: 1972-2170 bp Feature: domain Description: GIIM Note: maturase Location: 1 972-21 70 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NBKP01000035.1 Escherichia coli strain Spr2012_WWKa_ALT_35 Cont035, whole genome shotgun sequence (3004 bp)
Overview 1 RT 1: 93-2540 bp Neighborhood of RT #1 [93, 2540] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1910-2347 bp Feature: gene Location: 2358-2540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NBKP01000036.1 Escherichia coli strain Spr2012_WWKa_ALT_35 Cont036, whole genome shotgun sequence (3687 bp)
Overview 1 RT 1: 93-2586 bp Neighborhood of RT #1 [93, 2651] RVT-GII GIIM PHA02517 Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 66-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173 -13 71 bp Feature: gene Location: 1570-1995 bp Feature: gene Location: 2208-2651 bp Feature: domain Description: PHA02517 Location: 2244-2586 bp Feature: domain Description: PHA02517 Location: 2244-2586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NBKP01000037.1 Escherichia coli strain Spr2012_WWKa_ALT_35 Cont037, whole genome shotgun sequence (42667 bp)
Overview 1 RT 1: 823-3428 bp Neighborhood of RT #1 [823, 3526] RVT-GII GIIM PHA02517 AcrR Feature: gene Location: 823-2181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931-1663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931-1663 bp Feature: domain Description: GIIM Note: maturase Location: 1738-1936 bp Feature: domain Description: GIIM Note: maturase Location: 1738-1936 bp Feature: gene Location: 2298-2738 bp Feature: domain Description: PHA02517 Location: 2301-2727 bp Feature: domain Description: PHA02517 Location: 2301-2727 bp Feature: gene Location: 2954-3526 bp Feature: domain Description: AcrR Location: 2972-3428 bp Feature: domain Description: AcrR Location: 2972-34 28 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), AcrR (COG1309), RVT-GII, GIIM (pfam08388)

Seq: NBKP01000038.1 Escherichia coli strain Spr2012_WWKa_ALT_35 Cont038, whole genome shotgun sequence (22866 bp)
Overview 1 RT 1: 2-3614 bp Neighborhood of RT #1 [2, 3619] RVT-GII GIIM PHA02517 fruct_sucro_rep Feature: gene Location: 2-364 bp Feature: gene Location: 658-2181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931-1663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931-1663 bp Feature: domain Description: GIIM Note: maturase Location: 1738-1936 bp Feature: domain Description: GIIM Note: maturase Location: 1738-1936 bp Feature: gene Location: 2339-2503 bp Feature: domain Description: PHA02517 Location: 2378-2471 bp Feature: domain Description: PHA025 17 Location: 2378-2471 bp Feature: gene Location: 2615-3619 bp Feature: domain Description: fruct_sucro_rep Location: 2636-3614 bp Feature: domain Description: fruct_sucro_rep Location: 2636-3614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), fruct_sucro_rep (TIGR02417), RVT-GII, GIIM (pfam08388)

Seq: NBKP01000098.1 Escherichia coli strain Spr2012_WWKa_ALT_35 Cont098, whole genome shotgun sequence (17898 bp)
Overview 1 RT 1: 2644-6621 bp Neighborhood of RT #1 [2644, 6621] HTH_XRE RVT-Retrons PRK13889 Feature: gene Location: 2644-2859 bp Feature: gene Location: 2950-3231 bp Feature: domain Description: HTH_XRE Location: 2965-3130 bp Feature: domain Description: HTH_XRE Location: 296 5-3130 bp Feature: gene Location: 3224-4324 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3365-3917 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 336 5-3917 bp Feature: gene Location: 4401-5903 bp Feature: domain Description: PRK13889 Location: 4404-4986 bp Feature: domain Description: PRK13889 Location: 4404-4986 bp Feature: gene Location: 6409-6621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional)