myRT

myRT report for GCA_003149045.1_ASM314904v1

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Seq: QGDU01000003.1 Fibrobacter sp. UWR4 Ga0136291_103, whole genome shotgun sequence (137833 bp)
Overview 1 RT 1: 130097-134252 bp Neighborhood of RT #1 [130097, 134252] Fib_succ_major Avd_like RVT-DGRs Feature: gene Location: 130097-130963 bp Feature: domain Description: Fib_succ_major Location: 130469-130958 bp Feature: domain Description: Fib_succ_major Location: 1 30469-1 30958 bp Feature: gene Location: 131099-131884 bp Feature: domain Description: Avd_like Location: 131519-131798 bp Feature: domain Description: Avd_like Location: 1 31 51 9-1 31 798 bp Feature: gene Location: 132092-133258 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 132362-133067 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 32362-1 33067 bp Feature: gene Location: 133380-133868 bp Feature: gene Location: 133887-134252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fib_succ_major (TIGR02145), Avd_like (cd16376), RVT-DGRs

Seq: QGDU01000005.1 Fibrobacter sp. UWR4 Ga0136291_105, whole genome shotgun sequence (134920 bp)
Overview 1 RT 1: 61711-68241 bp Neighborhood of RT #1 [61711, 68249] CBM_4_9 Glyco_10 Fib_succ_major RVT-DGRs Avd_like Fib_succ_major Feature: gene Location: 61711-63516 bp Feature: domain Description: CBM_4_9 Location: 61918-62287 bp Feature: domain Description: CBM_4_9 Location: 61918-62 2 87 bp Feature: domain Description: Glyco_10 Location: 62611-63370 bp Feature: domain Description: Glyco_10 Location: 62 611-63370 bp Feature: gene Location: 63891-64757 bp Feature: gene Location: 64849-66312 bp Feature: domain Description: Fib_succ_major Location: 64933-65170 bp Feature: domain Description: Fib_succ_major Location: 64933-65170 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 65374-66076 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 65374-66076 bp Feature: gene Location: 66309-67085 bp Feature: domain Description: Avd_like Location: 66738-67005 bp Feature: domain Description: Avd_like Location: 66738-67005 bp Feature: gene Location: 67326-68249 bp Feature: domain Description: Fib_succ_major Location: 67608-68241 bp Feature: domain Description: Fib_succ_major Location: 67608-682 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CBM_4_9 (pfam02018), Glyco_10 (smart00633), Fib_succ_major (TIGR02145), RVT-DGRs, Avd_like (cd16376)

Seq: QGDU01000009.1 Fibrobacter sp. UWR4 Ga0136291_109, whole genome shotgun sequence (110092 bp)
Overview 1 RT 1: 39556-46198 bp Neighborhood of RT #1 [39556, 46476] Fib_succ_major Collagen Fib_succ_major RVT-DGRs Avd_like DUF2971 Feature: gene Location: 39556-40542 bp Feature: domain Description: Fib_succ_major Location: 40057-40540 bp Feature: domain Description: Fib_succ_major Location: 40057-40540 bp Feature: gene Location: 40568-43270 bp Feature: domain Description: Collagen Location: 40910-41054 bp Feature: domain Description: Collagen Location: 40910-41054 bp Feature: domain Description: Fib_succ_major Location: 42656-43262 bp Feature: domain Description: Fib_succ_major Location: 42656-43 262 bp Feature: gene Location: 43412-44500 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 43622-44324 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 43 622-443 24 bp Feature: gene Location: 44503-45219 bp Feature: domain Description: Avd_like Location: 44899-45178 bp Feature: domain Description: Avd_like Location: 44899-45178 bp Feature: gene Location: 45592-46476 bp Feature: domain Description: DUF2971 Location: 45985-46198 bp Feature: domain Description: DUF2971 Location: 45985-46198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fib_succ_major (TIGR02145), Collagen (pfam01391), RVT-DGRs, Avd_like (cd16376), DUF2971 (pfam11185)

Seq: QGDU01000027.1 Fibrobacter sp. UWR4 Ga0136291_127, whole genome shotgun sequence (54638 bp)
Overview 1 RT 1: 41098-47124 bp Neighborhood of RT #1 [41098, 47124] Collagen Fib_succ_major Avd_like RVT-DGRs Feature: gene Location: 41098-44169 bp Feature: domain Description: Collagen Location: 41488-41569 bp Feature: domain Description: Collagen Location: 4 14 88-4 1569 bp Feature: domain Description: Fib_succ_major Location: 43588-44161 bp Feature: domain Description: Fib_succ_major Location: 4 3588-4 4 161 bp Feature: gene Location: 44287-45108 bp Feature: domain Description: Avd_like Location: 44755-45034 bp Feature: domain Description: Avd_like Location: 4 4 755-4 5034 bp Feature: gene Location: 45342-46460 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 45588-46290 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4 5588-4 6290 bp Feature: gene Location: 46499-46678 bp Feature: gene Location: 46786-47124 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Collagen (pfam01391), Fib_succ_major (TIGR02145), Avd_like (cd16376), RVT-DGRs

Seq: QGDU01000048.1 Fibrobacter sp. UWR4 Ga0136291_148, whole genome shotgun sequence (17804 bp)
Overview 1 RT 1: 41-4631 bp Neighborhood of RT #1 [41, 4648] group_II_RT_mat RVT-UG19 RMtype1_S_StySKI-TRD2-CR2_like RMtype1_S_Vch69ORF1407P_TRD2-CR2_like RMtype1_S_Vch69ORF1407P_TRD2-CR2_like HsdM Feature: gene Location: 41-1840 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 104-383 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 104-383 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 443-932 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 443-932 bp Feature: gene Location: 1864-2985 bp Feature: domain Description: RMtype1_S_StySKI-TRD2-CR2_like Location: 1882-1990 bp Feature: domain Description: RMtype1_S_StySKI-TRD2-CR2_like Location: 1882-1990 bp Feature: domain Description: RMtype1_S_Vch69ORF1407P_TRD2-CR2_like Location: 2143-2398 bp Feature: domain Description: RMtype1_S_Vch69ORF1407P_TRD2-CR2_like Location: 2143-2398 bp Feature: domain Description: RMtype1_S_Vch69ORF1407P_TRD2-CR2_like Location: 2446-2971 bp Feature: domain Description: RMtype1_S_Vch69ORF1407P_TRD2-CR2_like Location: 2446-2971 bp Feature: gene Location: 3122-4648 bp Feature: domain Description: HsdM Location: 3176-4631 bp Feature: domain Description: HsdM Location: 3176-4631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-UG19, RMtype1_S_StySKI-TRD2-CR2_like (cd17259), RMtype1_S_Vch69ORF1407P_TRD2-CR2_like (cd17501), HsdM (COG0286)