myRT

myRT report for GCA_003150755.1_ASM315075v1

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Seq: QAMT01000004.1 Phascolarctobacterium sp. isolate CIM:MAG 843_2 contig_153675, whole genome shotgun sequence (545711 bp)
Overview 1 RT 1: 189102-195167 bp 2 RT 2: 291723-299570 bp Neighborhood of RT #1 [189102, 195181] RVT-DGRs Phage_XkdX Neighborhood of RT #2 [291723, 299584] COG4723 COG4733 RVT-DGRs Phage_XkdX Feature: gene Location: 189102-190640 bp Feature: gene Location: 190643-193366 bp Feature: gene Location: 193707-194834 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 193932-194547 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 93932-1 94547 bp Feature: gene Location: 194788-195039 bp Feature: gene Location: 195041-195181 bp Feature: domain Description: Phage_XkdX Location: 195059-195167 bp Feature: domain Description: Phage_XkdX Location: 1 95059-1 951 67 bp Feature: gene Location: 291723-295730 bp Feature: domain Description: COG4723 Location: 291903-292293 bp Feature: domain Description: COG4723 Location: 291 903-292293 bp Feature: domain Description: COG4733 Location: 293025-294624 bp Feature: domain Description: COG4733 Location: 293025-294624 bp Feature: gene Location: 295723-297765 bp Feature: gene Location: 298107-299234 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 298332-298947 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 298332-298947 bp Feature: gene Location: 299188-299439 bp Feature: gene Location: 299441-299584 bp Feature: domain Description: Phage_XkdX Location: 299459-299570 bp Feature: domain Description: Phage_XkdX Location: 299459-299570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_XkdX (pfam09693), COG4723 (Phage-related protein, tail component ), COG4733 (Phage-related protein, tail component )

Seq: QAMT01000002.1 Phascolarctobacterium sp. isolate CIM:MAG 843_2 contig_167054, whole genome shotgun sequence (627134 bp)
Overview 1 RT 1: 185432-189476 bp Neighborhood of RT #1 [185432, 189476] Phage_holin_4_1 RVT-DGRs PHA00653 Feature: gene Location: 185432-185908 bp Feature: domain Description: Phage_holin_4_1 Location: 185534-185867 bp Feature: domain Description: Phage_holin_4_1 Location: 185534-185867 bp Feature: gene Location: 185933-186217 bp Feature: gene Location: 186204-187355 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 186429-187125 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 18642 9-18712 5 bp Feature: gene Location: 187676-189154 bp Feature: domain Description: PHA00653 Location: 188225-189131 bp Feature: domain Description: PHA00653 Location: 1882 2 5-189131 bp Feature: gene Location: 189141-189476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_4_1 (pfam05105), RVT-DGRs, PHA00653 (mtd;major tropism determinant)