myRT

myRT report for GCA_003151335.1_20120700_P3D

Download annotations/find similar RTs

Seq: PLXE01000068.1 Acidobacteriaceae bacterium isolate palsa_357 73.20120700_P3D.5_contig_2533, whole genome shotgun sequence (3689 bp)
Overview 1 RT 1: 2-3104 bp Neighborhood of RT #1 [2, 3688] MauG RVT-GII YXWGXW YXWGXW Feature: gene Location: 2-304 bp Feature: gene Location: 426-1487 bp Feature: domain Description: MauG Location: 573-1419 bp Feature: domain Description: MauG Location: 573-1 41 9 bp Feature: gene Location: 1828-2142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1834-2053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 834-2053 bp Feature: gene Location: 2687-3688 bp Feature: domain Description: YXWGXW Location: 2951-3020 bp Feature: domain Description: YXWGXW Location: 2951 -3020 bp Feature: domain Description: YXWGXW Location: 3044-3104 bp Feature: domain Description: YXWGXW Location: 3044-31 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MauG (COG1858)

Seq: PLXE01000024.1 Acidobacteriaceae bacterium isolate palsa_357 73.20120700_P3D.5_contig_3693, whole genome shotgun sequence (18097 bp)
Overview 1 RT 1: 481-5596 bp Neighborhood of RT #1 [481, 5619] RVT-GII GIIM COG3415 CHASE3 sensory_box sensory_box sensory_box COG4251 Feature: gene Location: 481-1698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 685-1342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 685-1342 bp Feature: domain Description: GIIM Note: maturase Location: 1420-1636 bp Feature: domain Description: GIIM Note: maturase Location: 142 0-1636 bp Feature: gene Location: 2191-2637 bp Feature: domain Description: COG3415 Location: 2194-2578 bp Feature: domain Description: COG3415 Location: 2 194-2 578 bp Feature: gene Location: 3106-5619 bp Feature: domain Description: CHASE3 Location: 3220-3628 bp Feature: domain Description: CHASE3 Location: 32 2 0-362 8 bp Feature: domain Description: sensory_box Location: 3787-4147 bp Feature: domain Description: sensory_box Location: 3787-4147 bp Feature: domain Description: sensory_box Location: 4156-4528 bp Feature: domain Description: sensory_box Location: 4156-452 8 bp Feature: domain Description: sensory_box Location: 4543-4876 bp Feature: domain Description: sensory_box Location: 4543-4876 bp Feature: domain Description: COG4251 Location: 4891-5596 bp Feature: domain Description: COG42 51 Location: 4891-5596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), CHASE3 (pfam05227), sensory_box (TIGR00229), COG4251 (Bacteriophytochrome (light-regulated signal transduction histidine kinase) ), RVT-GII, GIIM (pfam08388)