myRT

myRT report for GCA_003151655.1_20120700_P3D

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Seq: PLYB01000198.1 Gallionellaceae bacterium isolate palsa_1006 73.20120700_P3D.316_contig_50689, whole genome shotgun sequence (12987 bp)
Overview 1 RT 1: 5351-12524 bp Neighborhood of RT #1 [5351, 12529] RVT-UG19 RMtype1_S_EcoKI-TRD2-CR2_like RMtype1_S_EcoKI-TRD2-CR2_like HsdM Feature: gene Location: 5351-6298 bp Feature: gene Location: 6315-7232 bp Feature: gene Location: 7326-9380 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 7689-8172 bp Feature: RT Description: RVT-UG1 9 Note: UG1 9 RT Location: 7689-81 72 bp Feature: gene Location: 9387-11075 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 9651-10182 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD2-CR2_like Location: 9651 -1 01 82 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 10482-11052 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD2-CR2_like Location: 1 0482-1 1 052 bp Feature: gene Location: 11072-12529 bp Feature: domain Description: HsdM Location: 11084-12524 bp Feature: domain Description: HsdM Location: 1 1 084-1 2524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG19, RMtype1_S_EcoKI-TRD2-CR2_like (cd17261), HsdM (COG0286)

Seq: PLYB01000336.1 Gallionellaceae bacterium isolate palsa_1006 73.20120700_P3D.316_contig_63740, whole genome shotgun sequence (18526 bp)
Overview 1 RT 1: 15426-18511 bp Neighborhood of RT #1 [15426, 18525] PRK02090 glmM RVT-GII Feature: gene Location: 15426-16130 bp Feature: domain Description: PRK02090 Location: 15456-16107 bp Feature: domain Description: PRK02 090 Location: 15456-16107 bp Feature: gene Location: 16305-17666 bp Feature: domain Description: glmM Location: 16314-17655 bp Feature: domain Description: glmM Location: 16314-17655 bp Feature: gene Location: 18349-18525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18403-18511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18403-18511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02090 (phosphoadenylyl-sulfate reductase), glmM (TIGR01455), RVT-GII

Seq: PLYB01000004.1 Gallionellaceae bacterium isolate palsa_1006 73.20120700_P3D.316_contig_80172, whole genome shotgun sequence (18495 bp)
Overview 1 RT 1: 1-4266 bp Neighborhood of RT #1 [1, 4277] OMP_b-brl RVT-GII GIIM cobT Feature: gene Location: 1-126 bp Feature: gene Location: 499-1083 bp Feature: domain Description: OMP_b-brl Location: 517-1081 bp Feature: domain Description: OMP_b-brl Location: 517-1081 bp Feature: gene Location: 1243-2580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1534-2191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153 4-2191 bp Feature: domain Description: GIIM Note: maturase Location: 2266-2479 bp Feature: domain Description: GIIM Note: maturase Location: 2266-2479 bp Feature: gene Location: 2732-2899 bp Feature: gene Location: 3225-4277 bp Feature: domain Description: cobT Location: 3267-4266 bp Feature: domain Description: cobT Location: 3 267-4266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OMP_b-brl (pfam13505), RVT-GII, GIIM (pfam08388), cobT (PRK00105)