myRT

myRT report for GCA_003151795.1_20120700_P3D

Download annotations/find similar RTs

Seq: PLYL01000016.1 Candidatus Yanofskybacteria bacterium isolate palsa_1334 73.20120700_P3D.271_contig_129434, whole genome shotgun sequence (54562 bp)
Overview 1 RT 1: 38497-42814 bp Neighborhood of RT #1 [38497, 42814] ligA RVT-DGRs Feature: gene Location: 38497-38928 bp Feature: gene Location: 39018-41009 bp Feature: domain Description: ligA Location: 39033-41004 bp Feature: domain Description: ligA Location: 39033-41 004 bp Feature: gene Location: 41043-42032 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 41259-41874 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 41 259-41 874 bp Feature: gene Location: 42318-42560 bp Feature: gene Location: 42623-42814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ligA (PRK14351), RVT-DGRs

Seq: PLYL01000025.1 Candidatus Yanofskybacteria bacterium isolate palsa_1334 73.20120700_P3D.271_contig_21973, whole genome shotgun sequence (46890 bp)
Overview 1 RT 1: 42159-46067 bp Neighborhood of RT #1 [42159, 46067] hisS S26_SPase_I RVT-DGRs Avd_like Feature: gene Location: 42159-43559 bp Feature: domain Description: hisS Location: 42243-43455 bp Feature: domain Description: hisS Location: 42 2 43-43455 bp Feature: gene Location: 43712-44326 bp Feature: domain Description: S26_SPase_I Location: 43865-44264 bp Feature: domain Description: S2 6_SPase_I Location: 43865-442 64 bp Feature: gene Location: 44405-45346 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 44561-45173 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 44561-45173 bp Feature: gene Location: 45540-45761 bp Feature: domain Description: Avd_like Location: 45546-45741 bp Feature: domain Description: Avd_like Location: 45546-45741 bp Feature: gene Location: 45801-46067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hisS (TIGR00442), S26_SPase_I (cd06530), RVT-DGRs, Avd_like (cd16376)

Seq: PLYL01000005.1 Candidatus Yanofskybacteria bacterium isolate palsa_1334 73.20120700_P3D.271_contig_26300, whole genome shotgun sequence (65713 bp)
Overview 1 RT 1: 25282-29938 bp Neighborhood of RT #1 [25282, 29938] PRK10535 RVT-UG13 Glyco_transf_64 Peptidase_M23 Feature: gene Location: 25282-26505 bp Feature: domain Description: PRK10535 Location: 25306-26497 bp Feature: domain Description: PRK1053 5 Location: 253 06-26497 bp Feature: gene Location: 26641-27051 bp Feature: gene Location: 27535-28854 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 27949-28423 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 27949-28423 bp Feature: domain Description: Glyco_transf_64 Location: 28477-28687 bp Feature: domain Description: Glyco_transf_64 Location: 28477-28687 bp Feature: gene Location: 28864-29478 bp Feature: domain Description: Peptidase_M23 Location: 29092-29395 bp Feature: domain Description: Peptidase_M23 Location: 29092-293 95 bp Feature: gene Location: 29528-29938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10535 (macrolide ABC transporter ATP-binding protein/permease MacB), RVT-UG13, Glyco_transf_64 (pfam09258), Peptidase_M23 (pfam01551)